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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : int.1
DDBJ      :int          phage-related integrase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  348/915 : Eukaryota  0/199 : Viruses  9/175   --->[See Alignment]
d.163.1
:388 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  160->346 1aihA_ d.163.1.1 * 1.5e-33 29.4 %
:RPS:PFM   170->331 PF00589 * Phage_integrase 5e-17 40.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAL42205.1 GT:GENE int.1 GT:PRODUCT phage-related integrase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1184885..1186051 GB:FROM 1184885 GB:TO 1186051 GB:DIRECTION + GB:GENE int GB:PRODUCT phage-related integrase GB:PROTEIN_ID AAL42205.1 GB:DB_XREF GI:17739597 GB:GENE:GENE int LENGTH 388 SQ:AASEQ MAKKRGSSWEGTVTHKGARHRRSFATESEAELWELDSKAKLIRGEPIDMGEKAAKRRGDLPYTLGELVQHVYETHWAPMPSGAKQLINANLIVAEIGANLPVAKLGKADVDRARSKLLAAGNAPGTVNRKVAALSKCLSEAEDLGIIERKPKCNKYKESEHRVRRFTPDEEKKTLAFFDRIGHQDMADYTVLSLDTGMRQSEVLSLHFEDIQNGRVTVWGVGATGQRTKSGKSRTVPLTARAQAVFDRRREYTEGKAVFPSLSKNSVAHYWGRLSEALNLESDKQFVPHILRHEFCSRLASNGENAAAIQKLAGHATLLVTQRYVHLFGDELDDVIGRMEKKETLAGNRATTVIVDEIETDTQALAQLLSQLPQDQLKAIFKTVISAS GT:EXON 1|1-388:0| SEG 363->377|qalaqllsqlpqdql| RP:PFM:NREP 1 RP:PFM:REP 170->331|PF00589|5e-17|40.4|151/168|Phage_integrase| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| HM:SCP:REP 160->346|1aihA_|1.5e-33|29.4|170/170|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 510 OP:NHOMOORG 365 OP:PATTERN --------1111111----------------------------------------1------------ -1------111----------------------------------------------------1----------------------------1-11-----1-1--11---------1-1------1--1----2-1----111------------1-------------------1-----1------1-3111111111122222121111111113121-221111111-111111111111111111-1--1-11--1-111--11112----------------------------------------------------1------------21---1----1--1---3113212-222---33---11----111-1--11--11-----11111111111-12-2----222--2----11--221-21-1-1---1-1-11111111-11--32-11------11E7--11--------------211--------11-2-21111112-211-22-----21--111-1-1----11-12-2112-----111---111211221-111222113-1111--33112-1123--------------------1-1-11--2--1----121--1-112---1--11--1---1-----------21121-111-11212-21-1123--121111-2111--22--31--21--212-3131---1---1-1-2---2----122----------111--3------------11-------1-----1-346312-122112-522---1------21-1-1--111-21---1-11---------22----------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------11-------1---1111----------------1------------------------------------------------------------------------------------------1--------------------------------- DISOP:02AL 1-1,159-160,342-357,388-389| PSIPRED cEEccccEEEEEEEcccEEEEEccccHHHHHHHHHHHHHHHHcccccccccccHHHcccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHcccHHHccccccEEEEEEEcccccccccEEEEEccHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHHHcHHHHHHcccccccccccccccccHHHHHHHHccHHHHHHHHHHEEccc //