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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ksgA
DDBJ      :ksgA         rRNA-adenine N6,N6-dimethyltransferase
Swiss-Prot:KSGA_AGRT5   RecName: Full=Dimethyladenosine transferase;         EC=2.1.1.-;AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase;AltName: Full=16S rRNA dimethylase;AltName: Full=High level kasugamycin resistance protein ksgA;AltName: Full=Kasugamycin dimethyltransferase;

Homologs  Archaea  53/68 : Bacteria  898/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:276 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   10->269 3fuxC PDBj 8e-38 43.1 %
:RPS:PDB   13->208 3a25A PDBj 8e-16 17.3 %
:RPS:SCOP  27->276 1qyrA  c.66.1.24 * 2e-60 36.7 %
:HMM:SCOP  11->277 1i4wA_ c.66.1.24 * 6.4e-83 49.6 %
:RPS:PFM   21->272 PF00398 * RrnaAD 1e-55 56.7 %
:HMM:PFM   21->275 PF00398 * RrnaAD 6.4e-51 33.5 248/262  
:BLT:SWISS 1->276 KSGA_AGRT5 e-159 100.0 %
:PROS 51->79|PS01131|RRNA_A_DIMETH

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86909.1 GT:GENE ksgA GT:PRODUCT rRNA-adenine N6,N6-dimethyltransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1091799..1092629) GB:FROM 1091799 GB:TO 1092629 GB:DIRECTION - GB:GENE ksgA GB:PRODUCT rRNA-adenine N6,N6-dimethyltransferase GB:PROTEIN_ID AAK86909.1 GB:DB_XREF GI:15156135 GB:GENE:GENE ksgA LENGTH 276 SQ:AASEQ MAAIDGLPPLRDVIQRHGLDAKKSLGQNFLFDLNLTQKIARTAGPLDGVTVIEVGPGPGGLTRAILSLGAKKVIAVERDSRCLPVLAEIEAHYPGRLEVIEGDALKTDFEALVPAGEPVRIIANLPYNVGTQLLVNWLLPREWPPFWLSMTLMFQKEVGQRIVAEEGDNHYGRLGVLAGWRTVSEMAFDVPPQAFSPPPKVTSTVVHLLPKDKPLPCDVAKLERVTEAAFGQRRKMLRQSVKSLGGETLLEKAGIDPTRRAETLSVEEFVTLANCL GT:EXON 1|1-276:0| SW:ID KSGA_AGRT5 SW:DE RecName: Full=Dimethyladenosine transferase; EC=2.1.1.-;AltName: Full=S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase;AltName: Full=16S rRNA dimethylase;AltName: Full=High level kasugamycin resistance protein ksgA;AltName: Full=Kasugamycin dimethyltransferase; SW:GN Name=ksgA; OrderedLocusNames=Atu1103; ORFNames=AGR_C_2042; SW:KW Antibiotic resistance; Complete proteome; Methyltransferase;RNA-binding; rRNA processing; S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->276|KSGA_AGRT5|e-159|100.0|276/276| GO:SWS:NREP 5 GO:SWS GO:0046677|"GO:response to antibiotic"|Antibiotic resistance| GO:SWS GO:0008168|"GO:methyltransferase activity"|Methyltransferase| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| PROS 51->79|PS01131|RRNA_A_DIMETH|PDOC00871| BL:PDB:NREP 1 BL:PDB:REP 10->269|3fuxC|8e-38|43.1|246/265| RP:PDB:NREP 1 RP:PDB:REP 13->208|3a25A|8e-16|17.3|179/264| RP:PFM:NREP 1 RP:PFM:REP 21->272|PF00398|1e-55|56.7|247/256|RrnaAD| HM:PFM:NREP 1 HM:PFM:REP 21->275|PF00398|6.4e-51|33.5|248/262|RrnaAD| GO:PFM:NREP 3 GO:PFM GO:0000154|"GO:rRNA modification"|PF00398|IPR001737| GO:PFM GO:0000179|"GO:rRNA (adenine-N6,N6-)-dimethyltransferase activity"|PF00398|IPR001737| GO:PFM GO:0008649|"GO:rRNA methyltransferase activity"|PF00398|IPR001737| RP:SCP:NREP 1 RP:SCP:REP 27->276|1qyrA|2e-60|36.7|245/252|c.66.1.24| HM:SCP:REP 11->277|1i4wA_|6.4e-83|49.6|262/0|c.66.1.24|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 1271 OP:NHOMOORG 1139 OP:PATTERN --1111----------1111111111111111111111111111111111111111111111--1-11 1111211111111111111-1111111111111111211111-11111111111111111111111211111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111--11111-1111111111111111111111111122111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111-----1111111111111111-1111111111111111111111111-111111 22-1221-411122111111111111111-1111111111111-1-111111111111111-111111111111111-1111111111-1211111111111122212-2432223-223122222122272-2222122321312221222232222211221221423142232122F2221122331322232223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 98.9 SQ:SECSTR ###EccccEEEEEEEETTEEEEEETTTccccGGGHHHHHHHHHHccTTcEEEETTcTTTTTHHHHHHHTccEEEEEcccHHHHHHHHHHHTTcTTTEEEEcccGGGHHcEcccccccEEEEEEcccccGGGGHHHHHEEEEEEccccccHHEEEEEcccGGGTTTTTHHHHHHHHHTTTcEETcEEEEEEEccccccccccccEEEEETTEEEEEEEEEccccEEEEEEccccHHHHHHHHHHHHTTcEEEEEEETTEETTccccccEEEEEEcHH PSIPRED ccccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccEEEEEcEEEcccHHHcccccccEEEEEcccccccHHHHHHHHHcccccccEEEEEEEEEHHHHHHHHcccccccccHHHHHHHHHHcEEEEEEEcHHHcccccccEEEEEEEEEccccccccHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHcccccccccccccHHHHHHHHHcc //