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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : lexA
DDBJ      :lexA         LexA repressor
Swiss-Prot:LEXA_AGRT5   RecName: Full=LexA repressor;         EC=3.4.21.88;

Homologs  Archaea  0/68 : Bacteria  602/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.5b.87.1
:240 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->237 1jhhA PDBj 3e-16 30.2 %
:RPS:PDB   2->62 2co5B PDBj 3e-06 16.7 %
:RPS:PDB   139->239 1ay9A PDBj 3e-21 30.3 %
:RPS:SCOP  2->64 1jhfA1  a.4.5.2 * 3e-08 27.0 %
:RPS:SCOP  117->240 1jhcA  b.87.1.1 * 2e-23 30.9 %
:HMM:SCOP  2->70 1jhfA1 a.4.5.2 * 4.1e-18 47.8 %
:HMM:SCOP  114->238 1jhfA2 b.87.1.1 * 2.7e-33 38.7 %
:RPS:PFM   2->63 PF01726 * LexA_DNA_bind 9e-12 48.4 %
:HMM:PFM   2->63 PF01726 * LexA_DNA_bind 4.7e-19 41.9 62/65  
:HMM:PFM   155->220 PF00717 * Peptidase_S24 9.1e-18 33.8 65/70  
:BLT:SWISS 1->240 LEXA_AGRT5 e-124 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87187.1 GT:GENE lexA GT:PRODUCT LexA repressor GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1390170..1390892) GB:FROM 1390170 GB:TO 1390892 GB:DIRECTION - GB:GENE lexA GB:PRODUCT LexA repressor GB:PROTEIN_ID AAK87187.1 GB:DB_XREF GI:15156463 GB:GENE:GENE lexA LENGTH 240 SQ:AASEQ MLTRKQQELLLFIHERMKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNRARALEVIKLPEAYTPGARPQRGFSPSVIEGSLGKPKEPEPAPAVKAPANDFAGAATIPVMGRIAAGVPISAIQNNTHDLAVPVDMLGSGEHYALEVKGDSMIEAGIFDGDTVIIRNGNTANPGDIVVALVDDEEATLKRFRRKGASIALEAANPAYETRIFGPDRVKIQGKLVGLIRRYH GT:EXON 1|1-240:0| SW:ID LEXA_AGRT5 SW:DE RecName: Full=LexA repressor; EC=3.4.21.88; SW:GN Name=lexA; OrderedLocusNames=Atu1395; ORFNames=AGR_C_2577; SW:KW Autocatalytic cleavage; Complete proteome; DNA damage; DNA repair;DNA replication; DNA-binding; Hydrolase; Repressor; SOS response;Transcription; Transcription regulation. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->240|LEXA_AGRT5|e-124|100.0|240/240| GO:SWS:NREP 8 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0009432|"GO:SOS response"|SOS response| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| SEG 94->108|kpkepepapavkapa| BL:PDB:NREP 1 BL:PDB:REP 2->237|1jhhA|3e-16|30.2|192/197| RP:PDB:NREP 2 RP:PDB:REP 2->62|2co5B|3e-06|16.7|60/94| RP:PDB:REP 139->239|1ay9A|3e-21|30.3|99/108| RP:PFM:NREP 1 RP:PFM:REP 2->63|PF01726|9e-12|48.4|62/64|LexA_DNA_bind| HM:PFM:NREP 2 HM:PFM:REP 2->63|PF01726|4.7e-19|41.9|62/65|LexA_DNA_bind| HM:PFM:REP 155->220|PF00717|9.1e-18|33.8|65/70|Peptidase_S24| GO:PFM:NREP 2 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF01726|IPR006199| GO:PFM GO:0006508|"GO:proteolysis"|PF01726|IPR006199| RP:SCP:NREP 2 RP:SCP:REP 2->64|1jhfA1|3e-08|27.0|63/71|a.4.5.2| RP:SCP:REP 117->240|1jhcA|2e-23|30.9|123/130|b.87.1.1| HM:SCP:REP 2->70|1jhfA1|4.1e-18|47.8|69/0|a.4.5.2|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 114->238|1jhfA2|2.7e-33|38.7|124/126|b.87.1.1|1/1|LexA/Signal peptidase| OP:NHOMO 668 OP:NHOMOORG 604 OP:PATTERN -------------------------------------------------------------------- 111-111111111111111-11111111111111112222111111111111111111--111-2121111111111111111--1-1------------------------------------1---1-------11111111111111111----2111111--1111-1111122111121-1--11122111111111112211121111111111111111111111221111112111111-1111111-11111111111111111111-----------------------------------------------2112211111111111122111111111112231122211221---11--1--1111-1111111111111111111111111111-11111111111-1111111111111111111111111111111111111111111-----------------------------111111111111111111111111111111111111111121111211111111111111-211---------111111-1-1-2-------2-211211311111112-------------------------21-11-1111-11-------1----1-1---1----112------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111---1---------11121111111111111111----------1111112222122331222---------1--------------11222221111111--11111111------------------------------------1111111111-2- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 96.7 SQ:SECSTR #cccHHHHHHHHHHHHHHHGGGHHHHHHHTTTTHHHHHHTccHHHHHHHTTTTcccHHHHHHTTTTTTccGGGTcHHHHHHHHHHHHHHHcc#######cccccccccccccccccccTTTTccccccccccccccccccHHHHHcccGGGEEEEccccTTGGGTccTTcEEEEEccccccTTcEEEEEETTTEEEEEEEEccccccEEEcccTTcccEEccTccEEEEEEEEEEEcccE DISOP:02AL 77-100| PSIPRED cccHHHHHHHHHHHHHHHHccccccHHHHHHHccccccHHHHHHHHHHHHcccHHHccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccEEEccEEEEEEcccccccccccccEEEccHHHccccccEEEEEEcccccccccccccEEEEEccccccccEEEEEEEcccEEEEEEEEEEccEEEEEEcccccccEEEccccEEEEEEEEEEEEEcc //