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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : lipB
DDBJ      :lipB         lipoate biosynthesis protein B
Swiss-Prot:LIPB_AGRT5   RecName: Full=Octanoyltransferase;         EC=2.3.1.181;AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase;AltName: Full=Lipoyl/octanoyl transferase;AltName: Full=Lipoate-protein ligase B;

Homologs  Archaea  4/68 : Bacteria  595/915 : Eukaryota  118/199 : Viruses  0/175   --->[See Alignment]
d.104.1
:233 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->223 2qhsA PDBj 3e-27 38.2 %
:RPS:PDB   11->223 2artA PDBj 1e-31 16.9 %
:RPS:SCOP  1->210 1w66A1  d.104.1.3 * 3e-41 36.3 %
:HMM:SCOP  1->227 1w66A1 d.104.1.3 * 2.6e-65 45.3 %
:HMM:PFM   66->178 PF03099 * BPL_LplA_LipB 1.2e-14 26.5 102/125  
:BLT:SWISS 1->233 LIPB_AGRT5 e-123 100.0 %
:PROS 77->92|PS01313|LIPB
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87341.2 GT:GENE lipB GT:PRODUCT lipoate biosynthesis protein B GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1543672..1544373 GB:FROM 1543672 GB:TO 1544373 GB:DIRECTION + GB:GENE lipB GB:PRODUCT lipoate biosynthesis protein B GB:PROTEIN_ID AAK87341.2 GB:DB_XREF GI:159140096 GB:GENE:GENE lipB LENGTH 233 SQ:AASEQ MFPAAGSPPVRWRISEGLVAYGQAVEEMEREVAAIAAGEADELVWLLEHPPLYTAGTSADVADLIEPDRFPVFATGRGGEYTYHGPGQRVVYVMLDLKRRRQDVRAYVAALEDVIIRTLDKMNVRGERREDRVGVWVRRPEKPLLPDGGMAEDKIAALGIRLRKWVSFHGLSINVDPDLSHFSGIVPCGISAYGVTSLVDLGLPVMIGDVDVLLREAFEEVFGPAVPETGAGG GT:EXON 1|1-233:0| SW:ID LIPB_AGRT5 SW:DE RecName: Full=Octanoyltransferase; EC=2.3.1.181;AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase;AltName: Full=Lipoyl/octanoyl transferase;AltName: Full=Lipoate-protein ligase B; SW:GN Name=lipB; OrderedLocusNames=Atu1556; ORFNames=AGR_C_2865; SW:KW Acyltransferase; Complete proteome; Cytoplasm; Transferase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->233|LIPB_AGRT5|e-123|100.0|233/268| GO:SWS:NREP 3 GO:SWS GO:0008415|"GO:acyltransferase activity"|Acyltransferase| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| PROS 77->92|PS01313|LIPB|PDOC01017| SEG 124->139|vrgerredrvgvwvrr| BL:PDB:NREP 1 BL:PDB:REP 17->223|2qhsA|3e-27|38.2|191/210| RP:PDB:NREP 1 RP:PDB:REP 11->223|2artA|1e-31|16.9|195/247| HM:PFM:NREP 1 HM:PFM:REP 66->178|PF03099|1.2e-14|26.5|102/125|BPL_LplA_LipB| RP:SCP:NREP 1 RP:SCP:REP 1->210|1w66A1|3e-41|36.3|193/216|d.104.1.3| HM:SCP:REP 1->227|1w66A1|2.6e-65|45.3|214/0|d.104.1.3|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 773 OP:NHOMOORG 717 OP:PATTERN ------------------111----------------------------------------2------ 1-11111111111111111-111111111111111111111111111111111111111111111111111-----------1--11---11-111--1111-111111-------------------------1-111-1---11111111111111111111111111111-11-11111-111111--1----------------------------------------1------------------------------------------------------------------------------------------11---------------11-----------------1------1111---1--111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-1--11-1111-111-11111111111-1-------------------------111111111111111111111111111111111-1111111111111111111111111111-11211111111111111111111111111111111111111111111111111111111111111--11111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111---1111-----------------------------------------------11 ----------1-111-11-1---1111--1111-111------1-11-----1-11--------1-11--11--1111111-----11---11-111-1--2111--13-2-1121-111-11111-1111--111----11121-1----1111---1112111111-17--212222M2221222511212221111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 95.3 SQ:SECSTR ##########EEEccccTTcHHHHHHHHHHHHHHccTTcccEEEEEEccccEEEEcTTccHHHHccTTHcEEEEcccccccEEEcTTEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHTTcccccccccccccccccEEcccccTTcccccTTcEEETEETTEEEEEEEEEccccHHHHHHHccccccTTTcccGGGTTccccHHHHHHHHHHHHHHHHTccccccTTH# DISOP:02AL 1-6,229-234| PSIPRED cccccccccEEEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEEEccccEEEcccccHHHHcccccccEEEEccccEEEEEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccEEcccccEEEEEcccccccccccccccEEEEEEEEEcccEEEcEEEEccccccHHHccccccccccccEEEHHHHcccccHHHHHHHHHHHHHHHHccccccccccc //