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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : luxR
DDBJ      :luxR         transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  29/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.6
:226 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   166->226 2rnjA PDBj 8e-09 36.1 %
:RPS:PDB   166->225 3cloA PDBj 1e-17 38.3 %
:RPS:SCOP  166->226 1fseA  a.4.6.2 * 6e-16 37.7 %
:HMM:SCOP  144->226 1p4wA_ a.4.6.2 * 5.3e-19 32.5 %
:RPS:PFM   164->220 PF00196 * GerE 1e-07 40.4 %
:HMM:PFM   166->220 PF00196 * GerE 2.8e-20 43.6 55/58  
:BLT:SWISS 166->226 AHYR_AERSA 5e-14 52.5 %
:PROS 180->207|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86339.2 GT:GENE luxR GT:PRODUCT transcriptional regulator, LuxR family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 514221..514901 GB:FROM 514221 GB:TO 514901 GB:DIRECTION + GB:GENE luxR GB:PRODUCT transcriptional regulator, LuxR family GB:PROTEIN_ID AAK86339.2 GB:DB_XREF GI:159139669 GB:GENE:GENE luxR LENGTH 226 SQ:AASEQ MGKPLPRDQLAKNVAATAAAGNVAGALDLLVTYAGASHYLLARDDLLEETGLKFIVTSDWPFDLVRRLGIELTNSQNRSSEMEKCLSLLQPRLLLLPDDVSVPYGIDRQYSALSFCVGRIRLSLLLLFPEEAVPSPERLREIALLTGYCVSFGIASEAKTVRDIDLTERELECLFWIAEGKTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAYAVRNNLV GT:EXON 1|1-226:0| BL:SWS:NREP 1 BL:SWS:REP 166->226|AHYR_AERSA|5e-14|52.5|61/260| PROS 180->207|PS00622|HTH_LUXR_1|PDOC00542| SEG 11->26|aknvaataaagnvaga| SEG 86->96|lsllqprllll| BL:PDB:NREP 1 BL:PDB:REP 166->226|2rnjA|8e-09|36.1|61/67| RP:PDB:NREP 1 RP:PDB:REP 166->225|3cloA|1e-17|38.3|60/249| RP:PFM:NREP 1 RP:PFM:REP 164->220|PF00196|1e-07|40.4|57/57|GerE| HM:PFM:NREP 1 HM:PFM:REP 166->220|PF00196|2.8e-20|43.6|55/58|GerE| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 1 RP:SCP:REP 166->226|1fseA|6e-16|37.7|61/67|a.4.6.2| HM:SCP:REP 144->226|1p4wA_|5.3e-19|32.5|83/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 54 OP:NHOMOORG 29 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------1-11-1--------------------------2-1233333222254------------------------1---------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------221---1-------------------------------------------------------------------------111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 94 STR:RPRED 41.6 SQ:SECSTR ####################################################################################################################################TccHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTccHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccHHHHHHHHHHTccT DISOP:02AL 1-8,148-166| PSIPRED ccccccHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccc //