[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : lysE
DDBJ      :lysE         LysE family transporter
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  356/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:202 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   14->198 PF01810 * LysE 8e-09 31.1 %
:HMM:PFM   14->199 PF01810 * LysE 6.1e-48 30.3 185/192  
:BLT:SWISS 6->198 ARGO_ECOL6 4e-37 39.9 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86732.1 GT:GENE lysE GT:PRODUCT LysE family transporter GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(914897..915505) GB:FROM 914897 GB:TO 915505 GB:DIRECTION - GB:GENE lysE GB:PRODUCT LysE family transporter GB:PROTEIN_ID AAK86732.1 GB:DB_XREF GI:15155924 GB:GENE:GENE lysE LENGTH 202 SQ:AASEQ MDIQIFFTGLTMGLSLIVAIGAQNAFVLKQGLARSHVFAVCATCAISDALLIMVGVFGFQRISAIMPALDPIMRYAGAAFLIWYGAKSLYSALRSSEVLSVAERREASLWQTLAICLALTFLNPHVYLDTVVLLGTISTQFPGFEKTFAAGAATGSLLFFFSLGYGARWLRPIFEKPSAWRILEGVIAITMWAIAFKLVMGA GT:EXON 1|1-202:0| BL:SWS:NREP 1 BL:SWS:REP 6->198|ARGO_ECOL6|4e-37|39.9|193/211| TM:NTM 6 TM:REGION 5->27| TM:REGION 42->64| TM:REGION 71->93| TM:REGION 107->129| TM:REGION 151->173| TM:REGION 180->202| RP:PFM:NREP 1 RP:PFM:REP 14->198|PF01810|8e-09|31.1|183/190|LysE| HM:PFM:NREP 1 HM:PFM:REP 14->199|PF01810|6.1e-48|30.3|185/192|LysE| GO:PFM:NREP 2 GO:PFM GO:0006865|"GO:amino acid transport"|PF01810|IPR001123| GO:PFM GO:0016020|"GO:membrane"|PF01810|IPR001123| OP:NHOMO 379 OP:NHOMOORG 358 OP:PATTERN ----------------------------1--------------------------------------- ----1111111---1--21-21---122222-11111111----11-1111-111121----1-1--111-------------------------------------------------------------------------------------------------------------------------1--111111111111111-1--111111--1---------111------1-------1--11-------------------------------------------------------------------------------------------------------------------------------------------------11111111111-------------11111111111-1-1--111-111-11--------111----1------------1-11-1111-11-----1----1111111222211111111111111-12111111--11211111111111--1----11---------------1-1-11--1111------1------------11--------1-1111111-------11111-11--111111-1111111111112-------------11111111111111111-1111111111111111111111112111111-1111111111111111111--111-11111111---------1111--1111111-1-----1--11111111-111-11111111111111111-1----1-1----111111112112211111-1---------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 92-109| PSIPRED ccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcc //