[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : mclA.1
DDBJ      :mclA         methyl-accepting chemotaxis protein
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  432/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.274.1d.110.6d.92.1h.4.5
:615 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   377->570 1qu7A PDBj 2e-26 45.9 %
:RPS:PDB   218->265 2aswA PDBj 2e-04 20.8 %
:RPS:PDB   334->599 2ch7A PDBj 2e-25 20.7 %
:RPS:SCOP  135->191 3by8A1  d.110.6.1 * 5e-04 15.8 %
:RPS:SCOP  219->265 2aswA1  a.274.1.1 * 2e-05 21.3 %
:RPS:SCOP  418->610 3cmnA1  d.92.1.16 * 8e-21 6.3 %
:HMM:SCOP  89->190 1p0zA_ d.110.6.1 * 1.1e-11 24.5 %
:HMM:SCOP  319->600 2ch7B1 h.4.5.1 * 3.6e-71 46.2 %
:RPS:PFM   214->258 PF00672 * HAMP 2e-04 34.1 %
:RPS:PFM   418->600 PF00015 * MCPsignal 2e-20 39.3 %
:HMM:PFM   408->601 PF00015 * MCPsignal 2.1e-61 45.9 194/213  
:HMM:PFM   199->266 PF00672 * HAMP 9.2e-14 32.8 67/70  
:HMM:PFM   366->423 PF06009 * Laminin_II 0.00013 27.6 58/140  
:BLT:SWISS 223->614 Y4FA_RHISN 8e-75 45.7 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86341.2 GT:GENE mclA.1 GT:PRODUCT methyl-accepting chemotaxis protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 515805..517652 GB:FROM 515805 GB:TO 517652 GB:DIRECTION + GB:GENE mclA GB:PRODUCT methyl-accepting chemotaxis protein GB:PROTEIN_ID AAK86341.2 GB:DB_XREF GI:159139670 GB:GENE:GENE mclA LENGTH 615 SQ:AASEQ MHNRLFKSVAGKVVALTIGLITLSVAAVGFSTYIRLKDNIITTALRDTHGAMRGMAILYEMKVGGVALEMVDGDLKSVGRASIGTMRDNDLVDRTAAGNGGIATVFEAKAGEFIRLTTNLKNEKGERAAGTKLATDHPAFEKVSKGEAYFGTATLFGTSYMTGYMPVTNKTGATVGILFVGVPMDFYNAQIYSLRDMMVVCGALAMLGVGLLAYFVIKRTLQPLSKLTDAVKSLSDGDLETPIPYATNTNEFGNIARALVIFRENAIEKLAIEGKSAQERSAAESERHRNDAEKQELDGQIEFAVGEIASGLGRLSRGDLSRTIETPFAGRLDRLRTDFNESLLNLRDALGQIRERTLIIQNSGIEIEQSSVDLSKRTENQAASLEETAAAVEEITATVRSSAERAREANEAVRVTKQSADSSGSVVSNAVDAMSRIEGASRKIEQIIEVIDDIAFQTNLLALNAGIEAARAGEAGKGFAVVAQEVRELAQRSADAAREIKQLINQSTHEVSSGSKLVQEAGTVLSAISRQIVTVSQHVETIATATQDQSSALHNVNGSVNQMDQMTQQNAALAEQSSAASRVLSGEVEALLDLVQRFQMEQGSAAGSGRLNRAA GT:EXON 1|1-615:0| BL:SWS:NREP 1 BL:SWS:REP 223->614|Y4FA_RHISN|8e-75|45.7|392/845| COIL:NAA 58 COIL:NSEG 2 COIL:REGION 379->409| COIL:REGION 483->509| TM:NTM 2 TM:REGION 11->33| TM:REGION 196->217| SEG 199->213|vvcgalamlgvglla| SEG 386->416|eetaaaveeitatvrssaerareaneavrvt| SEG 465->480|agieaarageagkgfa| BL:PDB:NREP 1 BL:PDB:REP 377->570|1qu7A|2e-26|45.9|194/227| RP:PDB:NREP 2 RP:PDB:REP 218->265|2aswA|2e-04|20.8|48/56| RP:PDB:REP 334->599|2ch7A|2e-25|20.7|266/309| RP:PFM:NREP 2 RP:PFM:REP 214->258|PF00672|2e-04|34.1|44/69|HAMP| RP:PFM:REP 418->600|PF00015|2e-20|39.3|183/210|MCPsignal| HM:PFM:NREP 3 HM:PFM:REP 408->601|PF00015|2.1e-61|45.9|194/213|MCPsignal| HM:PFM:REP 199->266|PF00672|9.2e-14|32.8|67/70|HAMP| HM:PFM:REP 366->423|PF06009|0.00013|27.6|58/140|Laminin_II| GO:PFM:NREP 6 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00015|IPR004089| GO:PFM GO:0007165|"GO:signal transduction"|PF00015|IPR004089| GO:PFM GO:0016020|"GO:membrane"|PF00015|IPR004089| RP:SCP:NREP 3 RP:SCP:REP 135->191|3by8A1|5e-04|15.8|57/133|d.110.6.1| RP:SCP:REP 219->265|2aswA1|2e-05|21.3|47/54|a.274.1.1| RP:SCP:REP 418->610|3cmnA1|8e-21|6.3|189/294|d.92.1.16| HM:SCP:REP 89->190|1p0zA_|1.1e-11|24.5|94/0|d.110.6.1|1/1|Sensory domain-like| HM:SCP:REP 319->600|2ch7B1|3.6e-71|46.2|264/0|h.4.5.1|1/1|Methyl-accepting chemotaxis protein (MCP) signaling domain| OP:NHOMO 3364 OP:NHOMOORG 454 OP:PATTERN ------------------------4554---2---2--323221--16--111--------------- 224-----------------------------------------4---3---------------6---------------1---21----------------------4-------------------------1-----------345244-1122----1-231-2222--------------2------24111113235222342236545223111621111111165------------------------------------------------------------------------------------------23-2C11111114-33-11----9-6---434177363222-1---21--63-EHH6-----51BEH22-6E97J--------------1--114----HKKjQRIPTT99C-3-3-3-64755J---------B873-F69-------------------------------4--387545JIJFIGlGDFFEDQPKKKLBJGPSDLCF--FELLAdIHV13N83DJ7768BB3-------33--56KA54F896-E8446-EDE88CAB876376321S-------------------13-1---B7-33333-3-3577633387765734573--11154------EOef8IB5554543455-5545533535535555553---ab228877588888775855852424444--B56678868776---1----------18B6---------------111111-111835555CB8B64468ACBC---------B-789BBBBB574ABBBJJMJL8A9------7a772211-111-11---------------------------------1------A- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---------------------1--6-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 63.6 SQ:SECSTR #######################################################################################################################################################################################################################HHHHHHHHHHHHHHEEEEEETTEEEEEEccccccccccTTTccccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc######### DISOP:02AL 1-3,272-300,356-388,398-442,495-496,506-522,544-553,568-591,593-593,596-616| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccEEEcccccccccccccHHHHHHHHcccEEEEEEcccccEEEEEEEEEcccccccccccccccccHHHHHHccccEEEEEEEccEEEEEEEEEEEcccccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccc //