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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : mclA.2
DDBJ      :mclA         methyl-accepting chemotaxis protein
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  461/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.274.1d.92.1h.4.5
:604 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->181 2qhkA PDBj 6e-14 31.7 %
:BLT:PDB   212->259 2aswA PDBj 5e-05 39.6 %
:BLT:PDB   243->330 1ciiA PDBj 6e-04 26.1 %
:BLT:PDB   391->562 1qu7B PDBj 3e-28 49.4 %
:RPS:PDB   50->182 3c8cA PDBj 2e-09 15.3 %
:RPS:PDB   211->262 2aswA PDBj 1e-05 36.5 %
:RPS:PDB   327->590 2ch7A PDBj 4e-33 18.9 %
:RPS:SCOP  212->262 2aswA1  a.274.1.1 * 2e-06 37.3 %
:RPS:SCOP  391->604 3cmnA1  d.92.1.16 * 5e-26 6.2 %
:HMM:SCOP  312->592 2ch7B1 h.4.5.1 * 3e-71 47.9 %
:RPS:PFM   35->126 PF08269 * Cache_2 8e-18 44.0 %
:RPS:PFM   211->257 PF00672 * HAMP 5e-04 37.0 %
:RPS:PFM   398->592 PF00015 * MCPsignal 4e-21 39.5 %
:HMM:PFM   339->407 PF00015 * MCPsignal 0.00089 22.6 62/213  
:HMM:PFM   396->592 PF00015 * MCPsignal 2.9e-63 51.0 194/213  
:HMM:PFM   35->127 PF08269 * Cache_2 1.3e-32 40.2 92/95  
:HMM:PFM   194->258 PF00672 * HAMP 6.3e-13 26.6 64/70  
:BLT:SWISS 215->596 MCPA_CAUCR 5e-58 45.5 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87672.2 GT:GENE mclA.2 GT:PRODUCT methyl-accepting chemotaxis protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1888309..1890123) GB:FROM 1888309 GB:TO 1890123 GB:DIRECTION - GB:GENE mclA GB:PRODUCT methyl-accepting chemotaxis protein GB:PROTEIN_ID AAK87672.2 GB:DB_XREF GI:159140252 GB:GENE:GENE mclA LENGTH 604 SQ:AASEQ MKNVTISMRLYALVALFLAILAAALTFSLFESYREMERERKAGLAAMNETAVAIIKQYYQLEQGGSLTREAAQQQAKTTIAAMRYGNGSGYFWINDMHPTMVMHPIKPEMNGTDLTANKDPNGKALFVEFVNTVKAGGQGFVDYYWPKPGAPDPVEKFSHVAGFAPWGWIVGTGVYVDDLEAVFWRDAYFNGGLCVVVGLLVVGVAAFVVRSVTRPIDLIRQSMKRIADGDGAAEIQFADRGDEIGAIAKTLLVLRDSVNERSALQAREADQQRALEEARHGNEMVLRSASERQAHAMERLGHALEALANGDLTVELADIGSDYEKLRVDFNRAVGALHGAIEAIARTGQVVNDSASDISGATGNLSRRTEQQAAALEETAAALDEITATVRTASERANEARQMVQDTKTSAGRSGEIVRNAVDAMGRIEDSSKRIGQIISVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQEVRELAQRSANAAKEIKTLINRSAEEVGGGVALVRSTGDALDEIVALVNRVDGHVNSIATAAREQATGLQEINTSVNHMDQMTQQNAAMVEETTAASQTLAEESQQLRALLSRFELGQGAGRAVSRAA GT:EXON 1|1-604:0| BL:SWS:NREP 1 BL:SWS:REP 215->596|MCPA_CAUCR|5e-58|45.5|382/657| COIL:NAA 74 COIL:NSEG 3 COIL:REGION 274->288| COIL:REGION 371->405| COIL:REGION 475->498| TM:NTM 2 TM:REGION 8->30| TM:REGION 189->211| SEG 10->25|lyalvalflailaaal| SEG 71->76|aaqqqa| SEG 192->210|gglcvvvgllvvgvaafvv| SEG 370->390|teqqaaaleetaaaldeitat| SEG 457->475|agveaarageagrgfavva| BL:PDB:NREP 4 BL:PDB:REP 29->181|2qhkA|6e-14|31.7|142/144| BL:PDB:REP 212->259|2aswA|5e-05|39.6|48/56| BL:PDB:REP 243->330|1ciiA|6e-04|26.1|88/602| BL:PDB:REP 391->562|1qu7B|3e-28|49.4|172/221| RP:PDB:NREP 3 RP:PDB:REP 50->182|3c8cA|2e-09|15.3|111/238| RP:PDB:REP 211->262|2aswA|1e-05|36.5|52/56| RP:PDB:REP 327->590|2ch7A|4e-33|18.9|264/309| RP:PFM:NREP 3 RP:PFM:REP 35->126|PF08269|8e-18|44.0|91/95|Cache_2| RP:PFM:REP 211->257|PF00672|5e-04|37.0|46/69|HAMP| RP:PFM:REP 398->592|PF00015|4e-21|39.5|195/210|MCPsignal| HM:PFM:NREP 4 HM:PFM:REP 339->407|PF00015|0.00089|22.6|62/213|MCPsignal| HM:PFM:REP 396->592|PF00015|2.9e-63|51.0|194/213|MCPsignal| HM:PFM:REP 35->127|PF08269|1.3e-32|40.2|92/95|Cache_2| HM:PFM:REP 194->258|PF00672|6.3e-13|26.6|64/70|HAMP| GO:PFM:NREP 6 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00015|IPR004089| GO:PFM GO:0007165|"GO:signal transduction"|PF00015|IPR004089| GO:PFM GO:0016020|"GO:membrane"|PF00015|IPR004089| RP:SCP:NREP 2 RP:SCP:REP 212->262|2aswA1|2e-06|37.3|51/54|a.274.1.1| RP:SCP:REP 391->604|3cmnA1|5e-26|6.2|210/294|d.92.1.16| HM:SCP:REP 312->592|2ch7B1|3e-71|47.9|263/0|h.4.5.1|1/1|Methyl-accepting chemotaxis protein (MCP) signaling domain| OP:NHOMO 3951 OP:NHOMOORG 483 OP:PATTERN ------------------------3665---2--------1--11-11--111-1-1-1--------- 123-------------------------------------1---5---4-------------2-9---------------1----1----------------------4-------------------------1-----------24443311122------221-1232--------------2------3433333624641254125554623311-C12111111145------------------------------------------------------------------------------------------32-2C22211124-51122----826---543288465233-----1---62-EII6-----41IMY223HRHGX11-111-1-11-32822-4G11--ILLjRRIQUU99C-6-413-66666K1--------B873-S9L-------------------------------4--388655LKLHKImIGHGGFRRMMMNBLIRTFMDF--GFNMBdIHW23N93CJE768AF6-------33-1B9KCA5H8FB6PGABF-FIGFDGKDC7768B441V11-----------------13-11--CA-4775613-8AACB265A88977348C8--11266------DOef8IB5554543455-5545533535535555553---ab228877588888775855852424444--B56678868776---1---------21FBB---------------111111-11196AA98CCBD9877B9BE8---------C27A9DDDCD648FIBBJJMJL8A9------Nb662211111--1-1----------------------------1---21-311-D- ------------------------------------------------------------------------------------------------------------1-------------------------------------------------1----1---------------------1--7-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 548 STR:RPRED 90.7 SQ:SECSTR ############################HHHHHHHHHHHHHHHHHHHHHEEEEEEEcTTTccEEEEEEEEEcHHHHHHHHTccccTTTcEEEEEEETTccEEEccccGGGTTccHHHHcccccccHHHTcTTcccccccccEEEEETEGGGTTTEEEEEEEEEcTTccEEEEEEEcHHHHHH############################HHHHHHHHHHHHEEEEEETTEEEEEEccccccccccTTTccccHHHHHHHHHHHHHHTHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccETTTEEEEccG DISOP:02AL 1-1,261-287,291-292,294-294,343-383,391-421,432-433,483-514,537-545,559-585,588-605| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccEEEEEccccEEEEccccHHHccccccccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEEEEEcccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccc //