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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : metF.1
DDBJ      :metF         methylenetetrahydrofolate reductase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  38/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.23
:306 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   27->294 1b5tC PDBj 2e-20 17.6 %
:RPS:SCOP  27->294 1b5tA  c.1.23.1 * 2e-31 18.6 %
:HMM:SCOP  16->301 1v93A_ c.1.23.1 * 1.3e-41 23.8 %
:RPS:PFM   65->233 PF02219 * MTHFR 5e-08 29.9 %
:HMM:PFM   75->233 PF02219 * MTHFR 0.00038 23.4 145/287  
:BLT:SWISS 112->269 MTHR_HUMAN 5e-05 29.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87211.2 GT:GENE metF.1 GT:PRODUCT methylenetetrahydrofolate reductase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1414370..1415290) GB:FROM 1414370 GB:TO 1415290 GB:DIRECTION - GB:GENE metF GB:PRODUCT methylenetetrahydrofolate reductase GB:PROTEIN_ID AAK87211.2 GB:DB_XREF GI:159140040 GB:GENE:GENE metF LENGTH 306 SQ:AASEQ MGWSSFWDNSGADGDVVRSSNILAGWSIEVMPRTAAKIDDFRNILPDGTRVYIAHIDGTPIADMVSTAKRLHDEGFPVMPHLPARGISGKNELEDWLKRYQGEAGVTQALLLGGGQKQPAGSFSSSIDMIETGLFDKMGFTHLHLAGHPEGNRDIDSDGSSRGVDQALLWKQDFASRTDARLALTTQFAFEAKVVIEWAKRIGNMGVTIPVHVGIAGPTKLQTLIKFAIACGVGPSLKVLQKRALDLSRLFVPYEPTDFIAELIDHKAANPDSLIEHVHIFPLGGIKPSAEWMKKHASTGTLANVA GT:EXON 1|1-306:0| BL:SWS:NREP 1 BL:SWS:REP 112->269|MTHR_HUMAN|5e-05|29.5|129/656| RP:PDB:NREP 1 RP:PDB:REP 27->294|1b5tC|2e-20|17.6|245/267| RP:PFM:NREP 1 RP:PFM:REP 65->233|PF02219|5e-08|29.9|154/284|MTHFR| HM:PFM:NREP 1 HM:PFM:REP 75->233|PF02219|0.00038|23.4|145/287|MTHFR| GO:PFM:NREP 3 GO:PFM GO:0004489|"GO:methylenetetrahydrofolate reductase (NADPH) activity"|PF02219|IPR003171| GO:PFM GO:0006555|"GO:methionine metabolic process"|PF02219|IPR003171| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02219|IPR003171| RP:SCP:NREP 1 RP:SCP:REP 27->294|1b5tA|2e-31|18.6|253/275|c.1.23.1| HM:SCP:REP 16->301|1v93A_|1.3e-41|23.8|269/0|c.1.23.1|1/1|FAD-linked oxidoreductase| OP:NHOMO 46 OP:NHOMOORG 41 OP:PATTERN ------------------------1---1--------------------------------------- ----------------------------------------------1-------1----------11---------------2--------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------221---1-1-1-----11-1112111---------------------------------------------1-1-----------------------------------1----------1----------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------1111111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 245 STR:RPRED 80.1 SQ:SECSTR ##########################EEEEccccHHHHHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEcTTcc#HHHHHHHHHHHHHTTccEE#EEEcccccccHHHHHHHHHHH########cccEEEEEEcTTccTTcccHHHHH###HHHHHHHHHTEEEEE#####EcccccHHHHHHHHHHHHHTTccccEEcEEcccccHHHHHHHHHHHTccccHHHHTTcTTcHHH##HHHHHHHHHHHHHHHHHHTT###ccEEEEEcTTccHHHHHHHH############ DISOP:02AL 1-3,300-307| PSIPRED ccccccccccccccHHHHcccccccEEEEEcHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHccccccEEccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHccccccccccc //