[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : metF.2
DDBJ      :metF         methylenetetrahydrofolate reductase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  37/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.23
:306 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   117->224 1b5tC PDBj 6e-05 29.3 %
:RPS:PDB   11->284 1b5tC PDBj 5e-11 16.0 %
:RPS:SCOP  36->284 1b5tA  c.1.23.1 * 1e-19 16.3 %
:HMM:SCOP  7->292 1v93A_ c.1.23.1 * 4.5e-37 26.1 %
:RPS:PFM   46->224 PF02219 * MTHFR 3e-14 34.1 %
:HMM:PFM   129->224 PF02219 * MTHFR 9.6e-08 34.1 88/287  
:BLT:SWISS 138->224 MTHR1_SCHPO 1e-08 40.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87532.2 GT:GENE metF.2 GT:PRODUCT methylenetetrahydrofolate reductase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1748259..1749179 GB:FROM 1748259 GB:TO 1749179 GB:DIRECTION + GB:GENE metF GB:PRODUCT methylenetetrahydrofolate reductase GB:PROTEIN_ID AAK87532.2 GB:DB_XREF GI:159140183 GB:GENE:GENE metF LENGTH 306 SQ:AASEQ MVTKRIMLKLPDISAASLIPASIEASPAQVLGPASLAGIFPRGVRVYLTDTGAASQEKLVDAATHLRNLGYEPVPHLAARRIPSRVEFEEQVKRLAGEADVTDVLVVGGGVDRPAGPFASSMDMLSSGIFDRYGIKKIAIAGHPEGSPDFSEETAIAALRLKRDFGERSDAAMRIVTQFGFDPARFIAWAEGLAASGIDLPVHIGVSGPAKITTLLKYAALCGVGNSIAYLKKNALSLTTLARGHSPDSIVGPIERHWQANPQGPIRQIHVFPFGGLQNSADWLVSRGSWQTRDAGRPAPADSMAG GT:EXON 1|1-306:0| BL:SWS:NREP 1 BL:SWS:REP 138->224|MTHR1_SCHPO|1e-08|40.2|82/603| SEG 100->112|dvtdvlvvgggvd| BL:PDB:NREP 1 BL:PDB:REP 117->224|1b5tC|6e-05|29.3|99/267| RP:PDB:NREP 1 RP:PDB:REP 11->284|1b5tC|5e-11|16.0|256/267| RP:PFM:NREP 1 RP:PFM:REP 46->224|PF02219|3e-14|34.1|170/284|MTHFR| HM:PFM:NREP 1 HM:PFM:REP 129->224|PF02219|9.6e-08|34.1|88/287|MTHFR| GO:PFM:NREP 3 GO:PFM GO:0004489|"GO:methylenetetrahydrofolate reductase (NADPH) activity"|PF02219|IPR003171| GO:PFM GO:0006555|"GO:methionine metabolic process"|PF02219|IPR003171| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02219|IPR003171| RP:SCP:NREP 1 RP:SCP:REP 36->284|1b5tA|1e-19|16.3|233/275|c.1.23.1| HM:SCP:REP 7->292|1v93A_|4.5e-37|26.1|272/0|c.1.23.1|1/1|FAD-linked oxidoreductase| OP:NHOMO 44 OP:NHOMOORG 40 OP:PATTERN ------------------------1---1--------------------------------------- ----------------------------------------------1-------1----------11------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------221---1-1-1-----11-1112111---------------------------------------------1-1-----------------------------------1----------1----------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------1111111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 264 STR:RPRED 86.3 SQ:SECSTR ##########cEEEEEEcccccHHHHHHHHHHHHHHHTTcccEEEEcccccHHHHHHHHHHHHHHHHHTcccEEEEEEcTTc#cHHHHHHHHHHHHHTTccEEEEEcc#####cccccHHHHHHHHHHHcccEEEEEEcTTccTTccTTccHHHHHHHHHHHHHHTEHHHTcEEEEEcccccHHHHHHHHHHHHHTTccccEEcEEcccccHHHHHHHHHHHTccccHHHHHHTcTTcHHHHHHHHHHHHHHHHHHHH####HTTccEEEEEcTTccHHHHHHH###################### DISOP:02AL 1-1,6-7,293-307| PSIPRED cccHHcccccccEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHcHHHHHHHHHHHHHccccccEEccccccccHHHHHHHHHHHcccccHHHHHHcccHHHHHHHHccHHHHHHHHHHHHcccHHccccEEEEcccccHHHHHHHHHHccccccccccccccHHHccc //