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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : metF.3
DDBJ      :metF         methylenetetrahydrofolate reductase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  526/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
c.1.23
:296 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->289 1b5tA PDBj 2e-62 42.1 %
:RPS:PDB   14->288 1b5tC PDBj 3e-49 41.4 %
:RPS:SCOP  10->288 1b5tA  c.1.23.1 * 5e-75 41.9 %
:HMM:SCOP  1->288 1v93A_ c.1.23.1 * 1.1e-86 43.4 %
:RPS:PFM   14->284 PF02219 * MTHFR 3e-60 43.9 %
:HMM:PFM   7->287 PF02219 * MTHFR 6.2e-87 39.6 280/287  
:BLT:SWISS 1->289 METF_SALTY 6e-63 42.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87870.2 GT:GENE metF.3 GT:PRODUCT methylenetetrahydrofolate reductase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2087408..2088298) GB:FROM 2087408 GB:TO 2088298 GB:DIRECTION - GB:GENE metF GB:PRODUCT methylenetetrahydrofolate reductase GB:PROTEIN_ID AAK87870.2 GB:DB_XREF GI:159140332 GB:GENE:GENE metF LENGTH 296 SQ:AASEQ MRSETARRDGDIRLSFEFFPPKNAEMDAQLWETVAELKKWDPDFVSVTYGAGGSTKAPTLDAVRRMIGDSHLPTAAHLTCVDASRDDVHQVIEEFRNAGVRHFVALRGDPSTGIGTAYQPHPEGYENAAALVKGLREIGDFEISVSAYPEKHPESASETVDIDMLKRKADNGATRALTQFFFDNDVFERYMERVTAAGITIPVVPGIMPIQNLTQLKRFAGRCGTSVPRFLDERFEGYDEDLEGRARVAAEVAAEQIADLQRRGFNEFHLYTMNRAPLVDAVLENLGLQRLRRSAA GT:EXON 1|1-296:0| BL:SWS:NREP 1 BL:SWS:REP 1->289|METF_SALTY|6e-63|42.2|282/296| SEG 245->255|rarvaaevaae| BL:PDB:NREP 1 BL:PDB:REP 10->289|1b5tA|2e-62|42.1|273/275| RP:PDB:NREP 1 RP:PDB:REP 14->288|1b5tC|3e-49|41.4|261/267| RP:PFM:NREP 1 RP:PFM:REP 14->284|PF02219|3e-60|43.9|269/284|MTHFR| HM:PFM:NREP 1 HM:PFM:REP 7->287|PF02219|6.2e-87|39.6|280/287|MTHFR| GO:PFM:NREP 3 GO:PFM GO:0004489|"GO:methylenetetrahydrofolate reductase (NADPH) activity"|PF02219|IPR003171| GO:PFM GO:0006555|"GO:methionine metabolic process"|PF02219|IPR003171| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02219|IPR003171| RP:SCP:NREP 1 RP:SCP:REP 10->288|1b5tA|5e-75|41.9|272/275|c.1.23.1| HM:SCP:REP 1->288|1v93A_|1.1e-86|43.4|286/0|c.1.23.1|1/1|FAD-linked oxidoreductase| OP:NHOMO 851 OP:NHOMOORG 701 OP:PATTERN -------------------------------------------------------------------- ----11111111111---------------------11111111211-1----111-1--111-12211111111111---1-11111111211-----111-1111111---------------11111111111--------------------------------------------------11---------------------------------------------------------------------111--1-----11----1-111-------1--11111111111-------------111111111--11--1111111111--------1-1----1----11-2-1------1-1--11111-----111111111111111111111111-11111111111-111111111111111111111111111--------11111-11------------------------------1111111111111111111111111111111111111111111111111111111111111111111111111111-1111111112111-1-11---1111111--------11111---------------111-1111--1--111111111111111-1111-1111111111111111111111111111-1111111111111111111111111111111111111111111111111111-12222222122211-111111----1111-111-11-1111111111111111111111111111111111111---------1111111111111111111111111111111--111111------------------------------------1-111-1----11 ----111-21--1112222222222222222222222222222222222222222222222222222222211222222222222222-22222222222222333-2212121112111111121121491-212-11111121-111-1-111-2-11121211--11-2221111-----1121122422222221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 97.6 SQ:SECSTR HHHHHHTTTcccEEEEEEcccccHHHHHHHHHHHHHHHTTcccEEEEcccccHHHHHHHHHHHHHHHHHTcccEEEEEEcTTccHHHHHHHHHHHHHTTccEEEEEcccccHccccccccHHHHHccHHHHHHHHHHHcccEEEEEEcTTccTTcccHHHHHHHHHHHHHHTEEEEEEcccccHHHHHHHHHHHHHTTccccEEcEEcccccHHHHHHHHHHHTccccHHHHHHHTTcTTcHHHHHHHHHHHHHHHHHHHHHTTccEEEEEcTTccHHHHHHHHHHTcc####### DISOP:02AL 1-7,292-297| PSIPRED ccHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHccccccEEEEcccccccccccHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHHHHHHcccEEHHHccccHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHccccccccccc //