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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : motD
DDBJ      :motD         chemotaxis MotD protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:449 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   296->374 PF02120 * Flg_hook 3e-05 33.8 %
:HMM:PFM   305->380 PF02120 * Flg_hook 5.9e-18 28.9 76/85  
:BLT:SWISS 194->373 MOTD_RHIME 2e-25 34.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86382.1 GT:GENE motD GT:PRODUCT chemotaxis MotD protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 556015..557364 GB:FROM 556015 GB:TO 557364 GB:DIRECTION + GB:GENE motD GB:PRODUCT chemotaxis MotD protein GB:PROTEIN_ID AAK86382.1 GB:DB_XREF GI:15155510 GB:GENE:GENE motD LENGTH 449 SQ:AASEQ MIDATINAIVNAPPPDARASGANARDDAKGGSFGDALSTVRDERSPQSRHQDAGSAKEQHAKPDDEPEKTDAPVKRPPTFLNAIARDHAGEPRNHETVAEFQNALKTVRTSADNGKTGKKLKDETDRDAETAADTIDPKLAELKTVMIGAGDIATAKSPLEEIAQAIAGKVDSVKSDRAEPVHGKAEPSLKDMPTKMELAKNETDTGAEGGNDASAFRFSSSRSGTARALDMGTVQREGRVEFDVRDSSGKVADNVTVVDSRRFIGLAPSTNASALTGLIVNDPEWVSAMQPGSSLSNAAAQSSTGKVVHTLKLHMTPIELGSVTMSLRLAGDELAVHMTVESMAAYKKLQDDSKSILEGLKAQGLTVDNITISIASSDKSDQTGTQGNNQQNQQAQQQGQQASAGRNRDESGARDGRQGNGDNLGVHNEGMDGALGSGRSSADNGVYL GT:EXON 1|1-449:0| BL:SWS:NREP 1 BL:SWS:REP 194->373|MOTD_RHIME|2e-25|34.8|178/475| SEG 123->137|detdrdaetaadtid| SEG 214->224|asafrfsssrs| SEG 383->403|qtgtqgnnqqnqqaqqqgqqa| RP:PFM:NREP 1 RP:PFM:REP 296->374|PF02120|3e-05|33.8|77/85|Flg_hook| HM:PFM:NREP 1 HM:PFM:REP 305->380|PF02120|5.9e-18|28.9|76/85|Flg_hook| GO:PFM:NREP 3 GO:PFM GO:0003774|"GO:motor activity"|PF02120|IPR001635| GO:PFM GO:0009296|"GO:flagellum assembly"|PF02120|IPR001635| GO:PFM GO:0009424|"GO:bacterial-type flagellum hook"|PF02120|IPR001635| OP:NHOMO 14 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--111111111111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 16-27, 40-76, 87-99, 108-127, 165-189, 196-214, 226-252, 292-302, 354-355, 385-389, 397-423, 443-445| PSIPRED cccccEEHHccccccccccccccccccccccccccHHHHHHHcccccccccccccHHHHccccccccccccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccccccccccEEEcccHHHHcccccccccccccccccEEEEEcccccccHHccHHHHHHHHHEEEHHHccccccEEEEEEEEcccEEccccccccHHHHHHHHccHHHHHHcccccccccHHHHccccEEEEEEEEEEEEEEEEEEEEEEEEcccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccc //