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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : murC
DDBJ      :murC         UDP-N-acetylmuramate-alanine ligase
Swiss-Prot:MURC_AGRT5   RecName: Full=UDP-N-acetylmuramate--L-alanine ligase;         EC=6.3.2.8;AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase;

Homologs  Archaea  1/68 : Bacteria  869/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.5.1c.59.1c.72.2
:471 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->464 1gqyB PDBj 3e-95 42.4 %
:RPS:PDB   24->450 2am1A PDBj 1e-71 18.8 %
:RPS:SCOP  10->94 1j6uA1  c.5.1.1 * 1e-23 32.9 %
:RPS:SCOP  107->315 1j6uA3  c.72.2.1 * 1e-41 32.3 %
:RPS:SCOP  317->465 1gqqA2  c.59.1.1 * 7e-31 38.9 %
:HMM:SCOP  7->95 1j6uA1 c.5.1.1 * 1.4e-28 56.2 %
:HMM:SCOP  92->316 1j6uA3 c.72.2.1 * 1.8e-75 53.9 %
:HMM:SCOP  317->463 1p3dA2 c.59.1.1 * 4.1e-47 50.3 %
:RPS:PFM   112->296 PF08245 * Mur_ligase_M 1e-21 41.9 %
:RPS:PFM   321->365 PF02875 * Mur_ligase_C 1e-07 55.6 %
:HMM:PFM   112->298 PF08245 * Mur_ligase_M 9.7e-32 34.9 172/188  
:HMM:PFM   10->106 PF01225 * Mur_ligase 2.9e-25 50.0 72/76  
:HMM:PFM   318->403 PF02875 * Mur_ligase_C 1.7e-22 38.4 86/91  
:BLT:SWISS 1->471 MURC_AGRT5 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87843.1 GT:GENE murC GT:PRODUCT UDP-N-acetylmuramate-alanine ligase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2056028..2057443) GB:FROM 2056028 GB:TO 2057443 GB:DIRECTION - GB:GENE murC GB:PRODUCT UDP-N-acetylmuramate-alanine ligase GB:PROTEIN_ID AAK87843.1 GB:DB_XREF GI:15157227 GB:GENE:GENE murC LENGTH 471 SQ:AASEQ MKMPKAIGLVHFIGIGGIGMSGIAEVLHNLGHRVQGSDQADSANVQRLRDKGIEVFVGHTADNLGDAEVVVVSTAIKKNNPELIAAREKHLPIVRRAEMLAELMRFRNAIAIGGTHGKTTTTSMVATLLEAGNLDPTVINGGIINAYGTNARMGEGEWMVVEADESDGTFLKLPADVAVITNIDPEHLDHYGNFDAVRAAFRQFVENVPFYGFGVMCLDHPEVQALVGRIEDRKVITYGENPQADVRFSNVRIDGTRSIFDVEIRRRRTGKIFSFKDLVLPMPGRHNVSNATAAIAVANRLGISEADIKKGLASFAGVKRRFTLTGEANGVQVFDDYGHHPVEIKAVLAAAREACKGRIIAVHQPHRYSRLSSLFDDFAHCFNDADTILLAPVYAAGEDPIEGASSEALVSAIKAAGHRDARFLEKREDLASQVAAIANPGDFVVLLGAGNITQWAAALPSELKSISGKSE GT:EXON 1|1-471:0| SW:ID MURC_AGRT5 SW:DE RecName: Full=UDP-N-acetylmuramate--L-alanine ligase; EC=6.3.2.8;AltName: Full=UDP-N-acetylmuramoyl-L-alanine synthetase; SW:GN Name=murC; OrderedLocusNames=Atu2093; ORFNames=AGR_C_3796; SW:KW ATP-binding; Cell cycle; Cell division; Cell shape;Cell wall biogenesis/degradation; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Peptidoglycan synthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->471|MURC_AGRT5|0.0|100.0|471/471| GO:SWS:NREP 9 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0007049|"GO:cell cycle"|Cell cycle| GO:SWS GO:0051301|"GO:cell division"|Cell division| GO:SWS GO:0008360|"GO:regulation of cell shape"|Cell shape| GO:SWS GO:0007047|"GO:cellular cell wall organization"|Cell wall biogenesis/degradation| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009252|"GO:peptidoglycan biosynthetic process"|Peptidoglycan synthesis| SEG 13->23|igiggigmsgi| BL:PDB:NREP 1 BL:PDB:REP 10->464|1gqyB|3e-95|42.4|448/469| RP:PDB:NREP 1 RP:PDB:REP 24->450|2am1A|1e-71|18.8|404/442| RP:PFM:NREP 2 RP:PFM:REP 112->296|PF08245|1e-21|41.9|167/187|Mur_ligase_M| RP:PFM:REP 321->365|PF02875|1e-07|55.6|45/84|Mur_ligase_C| HM:PFM:NREP 3 HM:PFM:REP 112->298|PF08245|9.7e-32|34.9|172/188|Mur_ligase_M| HM:PFM:REP 10->106|PF01225|2.9e-25|50.0|72/76|Mur_ligase| HM:PFM:REP 318->403|PF02875|1.7e-22|38.4|86/91|Mur_ligase_C| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF08245|IPR013221| GO:PFM GO:0009058|"GO:biosynthetic process"|PF08245|IPR013221| GO:PFM GO:0005524|"GO:ATP binding"|PF02875|IPR004101| GO:PFM GO:0009058|"GO:biosynthetic process"|PF02875|IPR004101| GO:PFM GO:0016874|"GO:ligase activity"|PF02875|IPR004101| RP:SCP:NREP 3 RP:SCP:REP 10->94|1j6uA1|1e-23|32.9|85/89|c.5.1.1| RP:SCP:REP 107->315|1j6uA3|1e-41|32.3|192/207|c.72.2.1| RP:SCP:REP 317->465|1gqqA2|7e-31|38.9|149/154|c.59.1.1| HM:SCP:REP 7->95|1j6uA1|1.4e-28|56.2|89/0|c.5.1.1|1/1|MurCD N-terminal domain| HM:SCP:REP 92->316|1j6uA3|1.8e-75|53.9|206/0|c.72.2.1|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 317->463|1p3dA2|4.1e-47|50.3|147/0|c.59.1.1|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 1841 OP:NHOMOORG 881 OP:PATTERN ----------------------------------1--------------------------------- 3442111111112111111-11111111111121111111211211211112111111112111222333111111111221123212222212112--313323422232222222211111112322223232222221---231311112211121221113221122121111221221111112213233343434443443334333434333334331444433532333333333333333333223231132232112211233221322111322223322222222222333323332333332222222233433322222221211322311112222332133343323533333211114-111323411132332121211233333333333-112111232111122111111121112332323433313222222222111133321--------111222212112112111113223232222222222222222222222222222222222222222222322224333344322232222332222343331221111111222121121322342321111111111111111111111111222233422333333333433333343423331-13332-1-22222222222222222222-22222222222222222222233222222212222222222122222222221322232222333111333333333324321222332233333332333333422222222222222223333333444344444222222222322222322223222222211313322221112122121--------------------------2332222222233 -----------------------1-11----------------------------------------------------------------------------------------------------------------------------------------1---------11---1------3--1--3--2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 456 STR:RPRED 96.8 SQ:SECSTR #########EEEETTTcTTHHHHHHHHTcccccTTccccccccEEccGGccccccGGGGHHHHHHHTccEEEEccccccccEEEcccHHHcEHHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHTTTccEEEccTTccTTHHHHHHHTcTTccEEEEEccccTTHHHHHcccEEEEccccccccTTcccHHHHHHHHGGGTTTcTcTTcEEEEEccGGGGGGccccTccEEEEEcTTcTccccEEEEEEccccEEEEETTcccccccGGEEcEEEEccccHHHHHHHHHHHHHHHHTTccHHHHHHHGGGcccccccccEEccTTTcEEEEEcccccHHHHHHHHHHTTccccEEEEEEcccccTTHHHHHHHGGGccTTTccEEEccEEEEEcTTHHHHHHHHHccTTcEEEEEccccccTHHHHHHHHHHHccTTEEEEEEcccTcGcTcccHHHHHHc###### DISOP:02AL 1-4, 467-471| PSIPRED ccccHHcccEEEEEEcHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHcccEEEEcccHHHccccEEEEEccccccccHHHHHHHHccccEEHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEcccccccccccccccccEEEEEEccccccEEEEcccEEEEEcccHHHHHHcccHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHcccccEEEEEEcccccEEEEEEEEcccEEEEEEEEcccccccccccccEEEccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccEEEEEccccEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHHccEEEEEcccccccccHHHccHHHHHHHHHHcccccEEEEccHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHHHHHHHHccccc //