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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : murE
DDBJ      :murE         UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase
Swiss-Prot:MURE_AGRT5   RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase;         EC=6.3.2.13;AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase;AltName: Full=Meso-diaminopimelate-adding enzyme;AltName: Full=Meso-A2pm-adding enzyme;AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase;AltName: Full=UDP-MurNAc-tripeptide synthetase;

Homologs  Archaea  0/68 : Bacteria  866/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.59.1c.72.2c.98.1
:489 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   31->487 1e8cB PDBj 1e-44 37.3 %
:RPS:PDB   31->488 1e8cB PDBj 6e-62 32.6 %
:RPS:SCOP  31->99 1e8cA1  c.98.1.1 * 2e-06 31.9 %
:RPS:SCOP  104->328 1e8cA3  c.72.2.1 * 3e-41 32.3 %
:RPS:SCOP  333->485 1e8cA2  c.59.1.1 * 1e-31 44.1 %
:HMM:SCOP  1->100 1e8cA1 c.98.1.1 * 1e-23 42.4 %
:HMM:SCOP  99->330 1e8cA3 c.72.2.1 * 2.1e-70 43.9 %
:HMM:SCOP  331->488 1e8cA2 c.59.1.1 * 2.7e-44 46.5 %
:RPS:PFM   108->240 PF08245 * Mur_ligase_M 2e-06 44.8 %
:RPS:PFM   333->407 PF02875 * Mur_ligase_C 7e-12 50.0 %
:HMM:PFM   108->311 PF08245 * Mur_ligase_M 2.7e-44 38.4 185/188  
:HMM:PFM   333->415 PF02875 * Mur_ligase_C 5.9e-24 42.7 82/91  
:HMM:PFM   26->98 PF01225 * Mur_ligase 1e-17 46.6 73/76  
:BLT:SWISS 1->489 MURE_AGRT5 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87849.2 GT:GENE murE GT:PRODUCT UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2063709..2065178) GB:FROM 2063709 GB:TO 2065178 GB:DIRECTION - GB:GENE murE GB:PRODUCT UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase GB:PROTEIN_ID AAK87849.2 GB:DB_XREF GI:159140320 GB:GENE:GENE murE LENGTH 489 SQ:AASEQ MNLRDISGNAFPELKELLLSEIGAIEIGGITADSRKAAPGSLFVAVAGTKADGAAYVKDAVAKGAVAVVSGHAVEADVPVLVVTDPRLYLSLAASRFYGKQPDTMVAVTGTAGKTSVASFVRQIWAFAGHAAAQIGTTGVIAPGREDYGALTTPDPVTLHALLAELASEGVTHAAMEASSHGLDQRRLDGVHLSAAGFTNLGRDHMDYHPTIEDYMAAKMRLFDTLMEKGAPAVIFADDPWSDKAIGAAREAGLEVRTVGRNGQYLTLKRVEHFRHKQMIEVHHDGVIFEVDIPLAGDFQVANALVAAGLAMSTGVPAATALKALEKLVGAAGRLELVGQTKNGALAYVDYAHKPDALENVLTSVRPFTSGRIITVFGCGGDRDKGKRPIMGEVATRLSDIVIVTDDNPRSEDAATIRSEVMAAAAGALEIGDRAEAIRHAVSMLSHGDTLIVAGKGHEEGQIVGSVTLPFSDHEQVRSALAELEGSKI GT:EXON 1|1-489:0| SW:ID MURE_AGRT5 SW:DE RecName: Full=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; EC=6.3.2.13;AltName: Full=UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase;AltName: Full=Meso-diaminopimelate-adding enzyme;AltName: Full=Meso-A2pm-adding enzyme;AltName: Full=UDP-N-acetylmuramyl-tripeptide synthetase;AltName: Full=UDP-MurNAc-tripeptide synthetase; SW:GN Name=murE; OrderedLocusNames=Atu2099; ORFNames=AGR_C_3809; SW:KW ATP-binding; Cell cycle; Cell division; Cell shape;Cell wall biogenesis/degradation; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Peptidoglycan synthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->489|MURE_AGRT5|0.0|100.0|489/489| GO:SWS:NREP 9 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0007049|"GO:cell cycle"|Cell cycle| GO:SWS GO:0051301|"GO:cell division"|Cell division| GO:SWS GO:0008360|"GO:regulation of cell shape"|Cell shape| GO:SWS GO:0007047|"GO:cellular cell wall organization"|Cell wall biogenesis/degradation| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0009252|"GO:peptidoglycan biosynthetic process"|Peptidoglycan synthesis| SEG 16->30|elllseigaieiggi| SEG 50->76|kadgaayvkdavakgavavvsghavea| BL:PDB:NREP 1 BL:PDB:REP 31->487|1e8cB|1e-44|37.3|445/484| RP:PDB:NREP 1 RP:PDB:REP 31->488|1e8cB|6e-62|32.6|432/484| RP:PFM:NREP 2 RP:PFM:REP 108->240|PF08245|2e-06|44.8|116/187|Mur_ligase_M| RP:PFM:REP 333->407|PF02875|7e-12|50.0|74/84|Mur_ligase_C| HM:PFM:NREP 3 HM:PFM:REP 108->311|PF08245|2.7e-44|38.4|185/188|Mur_ligase_M| HM:PFM:REP 333->415|PF02875|5.9e-24|42.7|82/91|Mur_ligase_C| HM:PFM:REP 26->98|PF01225|1e-17|46.6|73/76|Mur_ligase| GO:PFM:NREP 5 GO:PFM GO:0005524|"GO:ATP binding"|PF08245|IPR013221| GO:PFM GO:0009058|"GO:biosynthetic process"|PF08245|IPR013221| GO:PFM GO:0005524|"GO:ATP binding"|PF02875|IPR004101| GO:PFM GO:0009058|"GO:biosynthetic process"|PF02875|IPR004101| GO:PFM GO:0016874|"GO:ligase activity"|PF02875|IPR004101| RP:SCP:NREP 3 RP:SCP:REP 31->99|1e8cA1|2e-06|31.9|69/101|c.98.1.1| RP:SCP:REP 104->328|1e8cA3|3e-41|32.3|223/234|c.72.2.1| RP:SCP:REP 333->485|1e8cA2|1e-31|44.1|152/160|c.59.1.1| HM:SCP:REP 1->100|1e8cA1|1e-23|42.4|92/101|c.98.1.1|1/1|MurE/MurF N-terminal domain| HM:SCP:REP 99->330|1e8cA3|2.1e-70|43.9|230/0|c.72.2.1|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 331->488|1e8cA2|2.7e-44|46.5|157/0|c.59.1.1|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 1003 OP:NHOMOORG 880 OP:PATTERN -------------------------------------------------------------------- 1113111111112111111-1111111111121111112211112111111111111111111111111211----111111221111111111111--111111111111111111111111111111111121111111---111111111111111111111111111111111111111211111113111131312211321112111112111112222111121111111111111111111111111-11112111112211111111111111111111111111111111111111111111111111111112232211111111111111123311111212212222213421111111111-111111111111112111111111111111111-111111111112122111112111111211111111111111111111112111111------11111111111111111111112111111111111111111111121111111111111211221111121112112211122131111111112111113111111111111111111111111111111111111111111111111111111221111112211111111211222112111111-12111-1-11111111121111111111-11111111111111111111111111111111111111111111111111111211111111111111111111222211111111111121121111111111111111111111111111111111222222221222111111111111111111111111111121111111111111111--------------------------1211111111111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1119111-12121-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 458 STR:RPRED 93.7 SQ:SECSTR ##############################EccGGGccTTcEEEEcccccccGGGGHHHHHHTTccEEEEEcTTTcTEEEEEETTHHHHHHHHHHHHTTcGGGHHHHHHHHTTccEEEcTTccEETTcccccccTTcccTTccccTTccccccccHHHHHHHHHHHTHHTTccEEEEccHHHHHTTTTTTccccEEEEcccccccHHHHccHHHHHHHHHHHccEGGccccEEEEETTcHHHHHHHTTcTTcEEEEccccTTTccEEEEEEEEEEccccEEEEEETTccEEEEEcccHHHHHHHHHHHHHHHHTTccHHHHHHHGGGccccTTcEEEccccTTccEEEEEccccHHHHHHHHHHHHHTccccEEEEEccccccccTHHHHHGHHHHHHccEEEEccccccTccHHHHHHHHHTTccTccEEccHHHHHHHHHHHccTTcEEEEEccTTccEEEETTEEEEccHHHHHHHHHTcccTTc# DISOP:02AL 488-490| PSIPRED ccHHHHHHHccHHHHHHHHcccccEEEEEEEEcccccccccEEEEEccccccHHHHHHHHHHcccEEEEEcccccccccEEEEccHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHccccEEEEccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHccccccEEEEEccccHHHHHHcccHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHcccEEEEEccccccEEEEEEEEccccEEEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHHcccccEEEEEcccccHHHHHccEEEcccHHHHHHHHHHHHHcccc //