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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : mutS
DDBJ      :mutS         DNA mismatch repair protein, MutS family
Swiss-Prot:MUTS_AGRT5   RecName: Full=DNA mismatch repair protein mutS;

Homologs  Archaea  19/68 : Bacteria  775/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
a.113.1c.37.1c.55.6d.203.1d.75.2
:883 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->817 1ng9A PDBj e-127 39.8 %
:BLT:PDB   838->877 2ok2A PDBj 5e-04 40.0 %
:RPS:PDB   1->818 1e3mA PDBj e-122 33.0 %
:RPS:SCOP  3->109 1e3mA4  d.75.2.1 * 1e-45 57.8 %
:RPS:SCOP  110->261 1e3mA3  c.55.6.1 * 2e-23 23.8 %
:RPS:SCOP  270->573 1e3mA1  a.113.1.1 * 8e-69 29.4 %
:RPS:SCOP  704->805 2v4jC1  d.203.1.1 * 2e-31 20.0 %
:HMM:SCOP  1->109 1e3mA4 d.75.2.1 * 1.5e-39 54.8 %
:HMM:SCOP  110->269 1e3mA3 c.55.6.1 * 4.2e-37 37.7 %
:HMM:SCOP  270->577 1e3mA1 a.113.1.1 * 7.8e-79 40.7 %
:HMM:SCOP  578->820 1e3mA2 c.37.1.12 * 8.3e-66 37.2 %
:RPS:PFM   1->114 PF01624 * MutS_I 2e-36 62.4 %
:RPS:PFM   125->227 PF05188 * MutS_II 8e-06 31.0 %
:RPS:PFM   267->574 PF05192 * MutS_III 3e-44 39.1 %
:RPS:PFM   580->813 PF00488 * MutS_V 6e-73 58.7 %
:HMM:PFM   578->818 PF00488 * MutS_V 2.9e-103 59.2 233/234  
:HMM:PFM   265->575 PF05192 * MutS_III 1.7e-58 46.5 213/219  
:HMM:PFM   1->115 PF01624 * MutS_I 4.3e-45 60.0 110/113  
:HMM:PFM   124->251 PF05188 * MutS_II 9.9e-29 34.4 122/137  
:BLT:SWISS 1->883 MUTS_AGRT5 0.0 100.0 %
:PROS 279->294|PS00063|ALDOKETO_REDUCTASE_3
:PROS 708->724|PS00486|DNA_MISMATCH_REPAIR_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86162.2 GT:GENE mutS GT:PRODUCT DNA mismatch repair protein, MutS family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 336889..339540 GB:FROM 336889 GB:TO 339540 GB:DIRECTION + GB:GENE mutS GB:PRODUCT DNA mismatch repair protein, MutS family GB:PROTEIN_ID AAK86162.2 GB:DB_XREF GI:159139595 GB:GENE:GENE mutS LENGTH 883 SQ:AASEQ MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVPVHAADDYLQKLILRGYRVAVCEQIEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSPTESNYLMALARIRGSAEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVADSLFHDEELRPVFDVLGRVAVPQPAILFDSAVAEGRIARYFNVSTLDGFGTFSRVEMAAAAAAVAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGDRDGSLLHALNRTVTGGGARLLAERLMSPLTDPERINARLDAVAYLIDDVSLCDGLRDALKHVADMPRALSRLALERGGPRDLGAIRQGLVSAEKIAVILDGGLLPDELAKALRDLKALPGALEAMLGSMLADDLPLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYADETGIKSLKIKHNNVLGYFIEVTAGNADVMMATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFERMVEAVVQQAEAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGGRHPVVEQALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQIGSFVPAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTATFDGLSIAWAAVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEGDVIFLHEVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDDLPLFQIAVRREETRKAGPSKVEEALKSFNPDEMTPREALDALYALKKELGKA GT:EXON 1|1-883:0| SW:ID MUTS_AGRT5 SW:DE RecName: Full=DNA mismatch repair protein mutS; SW:GN Name=mutS; OrderedLocusNames=Atu0345; ORFNames=AGR_C_602; SW:KW ATP-binding; Complete proteome; DNA damage; DNA repair; DNA-binding;Nucleotide-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->883|MUTS_AGRT5|0.0|100.0|883/904| GO:SWS:NREP 5 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 279->294|PS00063|ALDOKETO_REDUCTASE_3|PDOC00061| PROS 708->724|PS00486|DNA_MISMATCH_REPAIR_2|PDOC00388| SEG 153->164|rlaettltrlla| SEG 235->242|aaaaaava| SEG 525->540|anaaaealtmeleafe| SEG 550->561|aeaikagalala| BL:PDB:NREP 2 BL:PDB:REP 1->817|1ng9A|e-127|39.8|776/794| BL:PDB:REP 838->877|2ok2A|5e-04|40.0|40/402| RP:PDB:NREP 1 RP:PDB:REP 1->818|1e3mA|e-122|33.0|752/765| RP:PFM:NREP 4 RP:PFM:REP 1->114|PF01624|2e-36|62.4|109/113|MutS_I| RP:PFM:REP 125->227|PF05188|8e-06|31.0|100/135|MutS_II| RP:PFM:REP 267->574|PF05192|3e-44|39.1|299/309|MutS_III| RP:PFM:REP 580->813|PF00488|6e-73|58.7|225/229|MutS_V| HM:PFM:NREP 4 HM:PFM:REP 578->818|PF00488|2.9e-103|59.2|233/234|MutS_V| HM:PFM:REP 265->575|PF05192|1.7e-58|46.5|213/219|MutS_III| HM:PFM:REP 1->115|PF01624|4.3e-45|60.0|110/113|MutS_I| HM:PFM:REP 124->251|PF05188|9.9e-29|34.4|122/137|MutS_II| GO:PFM:NREP 12 GO:PFM GO:0005524|"GO:ATP binding"|PF01624|IPR007695| GO:PFM GO:0006298|"GO:mismatch repair"|PF01624|IPR007695| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF01624|IPR007695| GO:PFM GO:0005524|"GO:ATP binding"|PF05188|IPR007860| GO:PFM GO:0006298|"GO:mismatch repair"|PF05188|IPR007860| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05188|IPR007860| GO:PFM GO:0005524|"GO:ATP binding"|PF05192|IPR007696| GO:PFM GO:0006298|"GO:mismatch repair"|PF05192|IPR007696| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF05192|IPR007696| GO:PFM GO:0005524|"GO:ATP binding"|PF00488|IPR000432| GO:PFM GO:0006298|"GO:mismatch repair"|PF00488|IPR000432| GO:PFM GO:0030983|"GO:mismatched DNA binding"|PF00488|IPR000432| RP:SCP:NREP 4 RP:SCP:REP 3->109|1e3mA4|1e-45|57.8|102/115|d.75.2.1| RP:SCP:REP 110->261|1e3mA3|2e-23|23.8|143/153|c.55.6.1| RP:SCP:REP 270->573|1e3mA1|8e-69|29.4|293/297|a.113.1.1| RP:SCP:REP 704->805|2v4jC1|2e-31|20.0|95/103|d.203.1.1| HM:SCP:REP 1->109|1e3mA4|1.5e-39|54.8|104/115|d.75.2.1|1/1|DNA repair protein MutS, domain I| HM:SCP:REP 110->269|1e3mA3|4.2e-37|37.7|151/0|c.55.6.1|1/1|DNA repair protein MutS, domain II| HM:SCP:REP 270->577|1e3mA1|7.8e-79|40.7|297/297|a.113.1.1|1/1|DNA repair protein MutS, domain III| HM:SCP:REP 578->820|1e3mA2|8.3e-66|37.2|234/234|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2537 OP:NHOMOORG 991 OP:PATTERN ------------------------22222222-----------1111111111----------1---- 222-------------------------------------2-----------------------------------------12121-332312333112322237242311111111111111122212221222244221112321221121222221211221122212122111122112212222122233333233333333333222233322233232222223333333333333333323333222222223332222222121212222222222322122222222222222222222222332222222224454554555535453443444422222332233322323222332232221111111111111111111111111111111111-121111111111111111111111111111111111111111111111111111111211111111111111111111111111-11111111111111111111111111111111111111--111111-11121111111211111111111222111311112122122211222222222222223111-------------------1-11-331111111111111111111111111111111-1211211-11121111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--11111111111211111111111111-111111121111111111111111-1111111111111111111111111111111111111111111111--1111111122222212212-------------------------3332332123111 3322666-A4425556666466655466665665666676666765656655664566666645346426664446637766666644-6C56666666675666527A595957575534554673B3ww8-76A4454645534544563475764538F46572343544967569*78967A56F69F7675565 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 858 STR:RPRED 97.2 SQ:SECSTR cHHHHHHHHHTcTTcEEEEEcTTEEEEEHHHHHHHHHHHTcccEEEcccTTcccEEEEEEGGGHHHHHHHHHHTTccEEEEEEcccGGGcccHHHHHcccEEEEEEEcTTTcccTTTccTTccccEEEEEEccccEEEcEEEEEEcTTTccEEEEccccHHHHHHHHHHcccEEEEETTcccGGTTccTTTTTcTTEEEEcGGGGcHHHHHHHHHHHHTccccGGGTcTTcHHHHHHHHHHHHHHHHHccccTTccccEccGGGGGccEcHHHHHHHTccccTTcccTTcHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHTTTHHHHHHHHHHHHTTccHHHHHHHHHHTcccHHHHHHHHHHHTTHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHcccccccccTTcccccTTccHHHHHHHHHHTcHHHHHHHHHHHHHHHHTcTTcEEEEETTTEEEEEEEHHHHTTccTTTccEcTTcEEEEcccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEEcccccEEEEEEccTTHHHHccccccTccTTTccccccccEEEEEcccccEEEEccTccHHHHHHHHHHHHHTTTccccccEEEEccccEEEEEEccHHHHHHHHHHcHHHHHHHHHHHcEHccTTcEEEEcccccccTTHHHHHHHHHHHHHHHTTccEEEEEccGGGGGHHHHTTEEEEEEEEcccEEccccEEEEEEEEcccccccHHHHHHHTTccHHHHHHHHHHHHHHTT###################HHHHHHHHHHHccHHHHHHHHccGGGccHHHHHHHHHHHH###### DISOP:02AL 48-51,85-98,814-849,882-884| PSIPRED ccHHHHHHHHHcccEEEEEEcccEEEEEHHHHHHHHHHHcEEEcccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHccccccEEEEEEEEEcccEEEEHHHccccccEEEEEEEEcccccccEEEEEEEEccccEEEEEEccHHHHHHHHHccccEEEEEccccccHHHHHHHHHHccccEEEccHHHccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccEEEccccEEEEcHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccEEEEEEEccccHHHHcccccccccEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccEEEEEEcccHHHHHHHcccccccEEEccEEEcccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccccEEEccEEEEEEEEcccccHHccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccEEEEEEEEEEEccEEEEEEEEEEccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHccc //