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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : mutY
DDBJ      :mutY         A/G-specific adenine glycosylase
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  774/915 : Eukaryota  119/199 : Viruses  0/175   --->[See Alignment]
a.96.1d.113.1
:367 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->354 1rrsA PDBj 5e-57 40.4 %
:RPS:PDB   7->220 2abkA PDBj 3e-45 20.3 %
:RPS:PDB   239->356 2b06A PDBj 3e-09 9.4 %
:RPS:SCOP  14->218 1ornA  a.96.1.1 * 2e-59 25.1 %
:RPS:SCOP  239->356 1x51A1  d.113.1.3 * 3e-12 22.9 %
:HMM:SCOP  6->233 1rrqA1 a.96.1.2 * 1.8e-67 37.9 %
:HMM:SCOP  230->358 1x51A1 d.113.1.3 * 2.8e-24 35.7 %
:RPS:PFM   47->160 PF00730 * HhH-GPD 2e-09 40.4 %
:HMM:PFM   48->166 PF00730 * HhH-GPD 4.3e-18 29.1 86/121  
:HMM:PFM   202->218 PF10576 * EndIII_4Fe-2S 4.5e-06 41.2 17/17  
:BLT:SWISS 14->320 YFHQ_BACSU 3e-58 41.3 %
:PROS 202->218|PS00764|ENDONUCLEASE_III_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86607.1 GT:GENE mutY GT:PRODUCT A/G-specific adenine glycosylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(793749..794852) GB:FROM 793749 GB:TO 794852 GB:DIRECTION - GB:GENE mutY GB:PRODUCT A/G-specific adenine glycosylase GB:PROTEIN_ID AAK86607.1 GB:DB_XREF GI:15155777 GB:GENE:GENE mutY LENGTH 367 SQ:AASEQ MLQKTAPSSYAQMLLAWYDRHHRELPWRTSPAMAARGKRADPYHVWLSEVMLQQTTVQAVKPYFLKFLAAWPRVDDLATAPVEDVMAAWAGLGYYARARNLKKCAEAVAREHGGVFPDTEEGLKQLPGIGDYTSAAVAAIAFNRQAAVMDGNVERVISRLFAIDAPLPGSKPAMKAKVAELTPAERPGDFAQAMMDLGATICTPKRPACALCPFNGACLALTRDEPERFPVKAAKKAKPVRLGAAFVAVNTEGEILLRRRIDSGLLGGMTEVPTTAWTARMDGGTEVSHAPFAAGWQMAGVIGHVFTHFELRLTVYRAQVPDGLQTGPDDGWWEPVTNLDAQALPTVMKKVIAEAIPSAFDKSRKFR GT:EXON 1|1-367:0| BL:SWS:NREP 1 BL:SWS:REP 14->320|YFHQ_BACSU|3e-58|41.3|298/369| PROS 202->218|PS00764|ENDONUCLEASE_III_1|PDOC00615| SEG 232->238|kaakkak| BL:PDB:NREP 1 BL:PDB:REP 14->354|1rrsA|5e-57|40.4|317/345| RP:PDB:NREP 2 RP:PDB:REP 7->220|2abkA|3e-45|20.3|202/211| RP:PDB:REP 239->356|2b06A|3e-09|9.4|117/150| RP:PFM:NREP 1 RP:PFM:REP 47->160|PF00730|2e-09|40.4|114/144|HhH-GPD| HM:PFM:NREP 2 HM:PFM:REP 48->166|PF00730|4.3e-18|29.1|86/121|HhH-GPD| HM:PFM:REP 202->218|PF10576|4.5e-06|41.2|17/17|EndIII_4Fe-2S| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 2 RP:SCP:REP 14->218|1ornA|2e-59|25.1|191/214|a.96.1.1| RP:SCP:REP 239->356|1x51A1|3e-12|22.9|118/142|d.113.1.3| HM:SCP:REP 6->233|1rrqA1|1.8e-67|37.9|219/221|a.96.1.2|1/1|DNA-glycosylase| HM:SCP:REP 230->358|1x51A1|2.8e-24|35.7|129/0|d.113.1.3|1/1|Nudix| OP:NHOMO 1250 OP:NHOMOORG 930 OP:PATTERN 11--------------1-1---1-11121221112--------22222-11232111111111---11 2122111111122111111-11111111111111111111111121122111111221--1112111222222222222122221311111212221--111111122211111111111111112211122221222212---11113111-22111111111-12-----111---1-11-1112211-22222222122222211222222222122222222222221222222222222222222222211111--1-111111121-11-222112222222222222222222222222222222222222222221211-----------11------2-11-2-11-111-111-11111-1--2-1111111112111111121111111111111111-221221121211111111111111211111111111111111111111111-111-----------------------------12111111111111111111111111111111111111111111112221212121111111221111111112222222222222112212---11112111211212--1--111111212222222-1-2122111111111111111111111111111111--1111111111111111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111112222221211111111111111111111111111111111111111111111111111---------11111111111111111111111111111--1-111111---1-1---12-------------------------1111111111211 11--231-312-111--11-----------------------------11111111-11111------------------------11-111-1111111--12-2-1212111212111211131-61GB5-313111121111--11111-212111331--11-----1-211111E1121122-21221121321 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 350 STR:RPRED 95.4 SQ:SECSTR ######HHHHHHHHHHHHHHcccccccccccHHHHccccccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHcHHHHHHHHHHHccGGGTTTHHHHHHHHHHHTcccccccGGGcTTGGGcccTccccEEEETTTTEEEcccEEEEEEEEEEETTTTEEEEEEEcccEEcccccTTccHHHHHHHHHHHHHcEEEEEccEEEEEEEEEcTTccEEEEEEEEEcEEEEcccccTTEEEEGGGGGGccccTTHHHHHHHHH########### DISOP:02AL 1-9, 361-367| PSIPRED ccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccccccccccccccccEEEEEEEEEEEEcccEEEEEEccccccccccccccccccHHHccHHHHHHHHHHHHHHHHcccEEEEccEEEEEEEEEEEEEEccccccccccEEccHHHHHHccccHHHHHHHHHHHHHHHHHccccc //