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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : nrt
DDBJ      :nrt          ABC transporter, nucleotide binding/ATPase protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  174/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.52.1c.94.1
:407 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->399 2g29A PDBj 1e-27 29.0 %
:RPS:PDB   28->327 1eexA PDBj 9e-26 11.7 %
:RPS:SCOP  22->198 1us4A  c.94.1.1 * 3e-06 14.6 %
:RPS:SCOP  187->368 1sdoA  c.52.1.21 * 2e-28 12.5 %
:HMM:SCOP  3->259 1xs5A_ c.94.1.1 * 4e-20 27.1 %
:RPS:PFM   144->253 PF09084 * NMT1 2e-04 32.1 %
:HMM:PFM   163->252 PF09084 * NMT1 0.00011 21.3 89/216  
:HMM:PFM   21->93 PF02424 * ApbE 0.00015 32.4 68/252  
:BLT:SWISS 3->398 NRTC_SYNY3 2e-33 30.1 %
:PROS 242->253|PS00070|ALDEHYDE_DEHYDR_CYS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86518.2 GT:GENE nrt GT:PRODUCT ABC transporter, nucleotide binding/ATPase protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 707905..709128 GB:FROM 707905 GB:TO 709128 GB:DIRECTION + GB:GENE nrt GB:PRODUCT ABC transporter, nucleotide binding/ATPase protein GB:PROTEIN_ID AAK86518.2 GB:DB_XREF GI:159139742 GB:GENE:GENE nrt LENGTH 407 SQ:AASEQ MPERHKVKAGFSPTIDCAVLIAAAEKGFAADEGIELELFREQSARAVLAALGGDDIHIGHLPAPVPVGSAVGLDDLPADIVGVFTLSLGGSATAVSHGFYDELYREGMKLPDPAAFGRAMARVCAARRAAGKNPPVFAVEDIVSTPFYTLRYLLGSCGVLLGRDMEIIEALPKAMPALLESGKVDALCTAEPAGSAVVLGGAGRIVTTGALIWHNAPEKILAVKKGWAEENATLLEGLLRALYRAGEWCANDANIEELAGILAAPQYIDENGEFLLPALTGYISTSQRDMQRFQEFFVTSAKAANFPWQSQALWFFSQMLRWGEVPAERRLEPTMAEAARNAYRPDIFRKAMKPLFVPVPGANLKLEGTLKEPVHVGASRTGLVLGPDCFFDGRVFDPETLEMDDEI GT:EXON 1|1-407:0| BL:SWS:NREP 1 BL:SWS:REP 3->398|NRTC_SYNY3|2e-33|30.1|355/670| PROS 242->253|PS00070|ALDEHYDE_DEHYDR_CYS|PDOC00068| SEG 118->130|ramarvcaarraa| BL:PDB:NREP 1 BL:PDB:REP 2->399|2g29A|1e-27|29.0|359/385| RP:PDB:NREP 1 RP:PDB:REP 28->327|1eexA|9e-26|11.7|291/551| RP:PFM:NREP 1 RP:PFM:REP 144->253|PF09084|2e-04|32.1|109/200|NMT1| HM:PFM:NREP 2 HM:PFM:REP 163->252|PF09084|0.00011|21.3|89/216|NMT1| HM:PFM:REP 21->93|PF02424|0.00015|32.4|68/252|ApbE| RP:SCP:NREP 2 RP:SCP:REP 22->198|1us4A|3e-06|14.6|158/298|c.94.1.1| RP:SCP:REP 187->368|1sdoA|2e-28|12.5|176/192|c.52.1.21| HM:SCP:REP 3->259|1xs5A_|4e-20|27.1|221/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 300 OP:NHOMOORG 175 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------1------------------1-------------------------------------1-136466444551-----3445652-1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11121------1333---21-33------------33333-4112--2333222222123521-221----2--------------12---------------------------------111------1111111111111111111-11111111-21111211111321211-1211-------------11-----------------------------1-----------------------------1-11111-2-------------------------2--------1111-11------------------------------11111-------------------1----------------------------------12112-------------------------1211111-11211112111---------2---------11-11---1111----------------------------------------------------------------1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 389 STR:RPRED 95.6 SQ:SECSTR ccccccEEEEEccHcHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHTTcEEEEEccTTHHHHTTccTTccHHHHHHHHHHTccEEEcccGGGTTTGGGcTTHHHHHHHHcEEEccccccccccHHHHHHHHHHHHTTccccccEEEEcccGGGcTTccccccGGGHHHHHTcccccccccHHHHHHHHHHHHHHHHHHHHHTTcccccHHHHHcccHHHHcccGGGcccccHHHHHHHHHHHHHTHHHcccTccHHHHHHHHHHTTcHHHHHHHHHHHHHHHHcGGcTTcEEETTTEEEcTTTcccccccTTccccccHHHHHHHHcHTcHHHHHcHHHHHHHHGHHHHHHHHHTcccG#####HHHHTcGGGccccccc#####ccEEcTTccEEcTT######## DISOP:02AL 1-2,401-408| PSIPRED cccccEEEEEEEccHHHHHHHHHHHccccHHHccEEEEEEcccHHHHHHHHHcccccEEEEccHHHHHHHHccccccccEEEEEEEcccccEEEEcHHHHHHHHHccccccccHHHHHHHHHcccHHHHccccccEEEEEccccHHHHHHHHHHHHccccHHHcEEEEEccHHHHHHHHHcccccEEEEcccHHHHHHHccccEEEEEcHHHcccccEEEEEEcHHHHHHcHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHcccccccccccccccHHHHccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHccccccccccccccccccHHHccccccccccccccccc //