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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ntrB
DDBJ      :ntrB         two component sensor kinase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  751/915 : Eukaryota  69/199 : Viruses  0/175   --->[See Alignment]
a.30.2d.110.3d.122.1d.123.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   205->363 1r62A PDBj 1e-18 38.8 %
:RPS:PDB   42->382 3crlA PDBj 4e-28 13.7 %
:RPS:SCOP  13->87 1d7eA  d.110.3.1 * 3e-05 10.7 %
:RPS:SCOP  131->331 1f51A  d.123.1.1 * 1e-19 12.0 %
:HMM:SCOP  11->118 1mzuA_ d.110.3.1 * 1.5e-07 24.0 %
:HMM:SCOP  129->199 1joyA_ a.30.2.1 * 7.1e-09 28.4 %
:HMM:SCOP  207->362 1r62A_ d.122.1.3 * 2.7e-34 31.8 %
:RPS:PFM   143->192 PF00512 * HisKA 6e-05 44.0 %
:RPS:PFM   247->364 PF02518 * HATPase_c 3e-11 40.2 %
:HMM:PFM   246->363 PF02518 * HATPase_c 3.9e-20 36.3 102/111  
:HMM:PFM   142->198 PF00512 * HisKA 1.1e-14 31.6 57/68  
:HMM:PFM   17->119 PF00989 * PAS 6.6e-11 22.5 102/113  
:BLT:SWISS 11->381 NTRB_RHIME e-164 78.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87236.1 GT:GENE ntrB GT:PRODUCT two component sensor kinase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1438154..1439302 GB:FROM 1438154 GB:TO 1439302 GB:DIRECTION + GB:GENE ntrB GB:PRODUCT two component sensor kinase GB:PROTEIN_ID AAK87236.1 GB:DB_XREF GI:15156520 GB:GENE:GENE ntrB LENGTH 382 SQ:AASEQ MSADKHSPADANQLAMAVLNAVQNPVILVDGEGFISFANWEAEAFFGASASHLARYRVSTFIPFGSPLLALIDQVRERRAPVNEYRVDLSSPRLGQDKLVDLYVAPVVSEPGSVVVVFQERSMADKIDRQLTHRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLEMSVPDEDRALTRLICDETDRIVSLVDRMEIFSDERPVDRVPVNIHSVLDHVKAIAKAGFARNIKISENYDPSLPAVYANRDQLVQVFLNLVKNAAEAVANQPDGEVVLTTAYRPGIRLSVAGSRERISLPLEFCVHDNGPGVPSDLLPHLFDPFITTKTNGSGLGLALVAKLIGAHGGIVECDSQNHRTTFRVLMPVSPEVALDDSSLPNTTGNDR GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 11->381|NTRB_RHIME|e-164|78.4|370/382| SEG 104->117|vapvvsepgsvvvv| BL:PDB:NREP 1 BL:PDB:REP 205->363|1r62A|1e-18|38.8|134/136| RP:PDB:NREP 1 RP:PDB:REP 42->382|3crlA|4e-28|13.7|329/381| RP:PFM:NREP 2 RP:PFM:REP 143->192|PF00512|6e-05|44.0|50/69|HisKA| RP:PFM:REP 247->364|PF02518|3e-11|40.2|102/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 246->363|PF02518|3.9e-20|36.3|102/111|HATPase_c| HM:PFM:REP 142->198|PF00512|1.1e-14|31.6|57/68|HisKA| HM:PFM:REP 17->119|PF00989|6.6e-11|22.5|102/113|PAS| GO:PFM:NREP 4 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 13->87|1d7eA|3e-05|10.7|75/119|d.110.3.1| RP:SCP:REP 131->331|1f51A|1e-19|12.0|166/181|d.123.1.1| HM:SCP:REP 11->118|1mzuA_|1.5e-07|24.0|104/0|d.110.3.1|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 129->199|1joyA_|7.1e-09|28.4|67/67|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 207->362|1r62A_|2.7e-34|31.8|151/156|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 6890 OP:NHOMOORG 843 OP:PATTERN ------------------------B3223833-----1222241A--317615--------------8 Ehx141-----2-1-2222-21--1422222-8111133326732212211-123132--223-3-13551---------612--323AA99-J33---436115BB9781111111111111116615444AFL3UUSSPA58Q1VAOZEF187231222218B4Jvy*C12-2---3-1--A63221118C8FFGEGHHGBGEHKKF5B9995HHJ59862DA433344PT1------------------122521223232342222222211222---11-1111-----------1111111111111111---1111-C75B23222342415644212165611424B5IGJID7154433521--NJGFBBE34424DCUPOB8CJJKMM7888788787B-WPXPOQbU9KH2CHHDHHDIKIEFHJ997BAA9C997F95545544547656Z9C22222222114811111111111111111-47C7345437KGGGIID8899IHLPBBBB6ADMIELCB24AC6DCC56BAAM9587F6778BA1111112117CHPH*sNGJqV8zhZYV3*Z*fUbjCZVWWYx*Ij--112---------------5---24452699BB38388455445579778659878--28A6A------95734447778788867-7776788665787667669656344535655555555565655365766672-655666654666--1311111433465J1B------------1213333323222A6EFGEDEJJBEAGFJMNJ---1-----6555B88788CGE8969BECEFAAB222211K2HH78BB----1--11---------------------------22244222224c2 -1--23--------5----1-11112-2211-12111222222222--3111111111-2221------1----------------21-12-----1111221517-4-3------------------------------------------------------------------122---1-25--7--42-3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 374 STR:RPRED 97.9 SQ:SECSTR ########HHHHHHHHHHHHHHccEEEEEcTTccEEEHcHHHHHHHHHHTcccccccHHHHHHHTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTTTccTTcHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHHHHHHcccTTcEEEEEHHHHHHHHHHHHHHHHccccEEEEEEEccccccccEEEEcHHHHHHHHHHHHHHHHHHHHTHHHHHccccccccEEEEEEEcccEEEEETEEEEEEEEccccccGGGTGGGGcTTTcccccccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEccTTTcccccccccHHHHHT DISOP:02AL 364-382| PSIPRED cHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEccHHHHHHHcccHHHHccccHHHHcccccHHHHHHHHHHHcccccccEEEEEEEEccccEEEEEEEEEEEEccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEccHHHHHHHHHHHHHHHHccccEEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccEEEEEEcccccccEEEEEEEEccccccHHHHHHHccccEEccccccccHHHHHHHHHHHcccEEEEEEccccEEEEEEEEcccccccccccccccccccc //