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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ntrC
DDBJ      :ntrC         two component response regulator
Swiss-Prot:NTRC_RHIME   RecName: Full=Nitrogen assimilation regulatory protein;

Homologs  Archaea  7/68 : Bacteria  858/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
a.102.3a.4.1c.23.1c.37.1
:483 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->373 3dzdA PDBj 1e-69 39.8 %
:BLT:PDB   377->475 1etoB PDBj 8e-12 37.2 %
:RPS:PDB   23->381 1e32A PDBj 1e-58 13.3 %
:RPS:PDB   433->479 3e7lD PDBj 4e-07 25.5 %
:RPS:SCOP  2->114 1oxbB  c.23.1.1 * 6e-16 19.5 %
:RPS:SCOP  88->465 1hn0A1  a.102.3.2 * 5e-47 10.4 %
:HMM:SCOP  2->183 1s8nA_ c.23.1.1 * 4.2e-40 39.9 %
:HMM:SCOP  137->382 1ny5A2 c.37.1.20 * 8.1e-77 41.5 %
:HMM:SCOP  350->475 1etoB_ a.4.1.12 * 8.7e-22 42.9 %
:RPS:PFM   5->114 PF00072 * Response_reg 2e-15 38.2 %
:RPS:PFM   138->302 PF00158 * Sigma54_activat 3e-61 64.2 %
:RPS:PFM   432->471 PF02954 * HTH_8 3e-04 47.5 %
:HMM:PFM   138->304 PF00158 * Sigma54_activat 2.1e-73 59.9 167/168  
:HMM:PFM   5->114 PF00072 * Response_reg 1.1e-26 32.7 110/112  
:HMM:PFM   432->472 PF02954 * HTH_8 3.8e-17 46.3 41/42  
:BLT:SWISS 3->481 NTRC_RHIME 0.0 91.9 %
:PROS 162->175|PS00675|SIGMA54_INTERACT_1
:PROS 224->239|PS00676|SIGMA54_INTERACT_2
:PROS 350->359|PS00688|SIGMA54_INTERACT_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87237.1 GT:GENE ntrC GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1439299..1440750 GB:FROM 1439299 GB:TO 1440750 GB:DIRECTION + GB:GENE ntrC GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK87237.1 GB:DB_XREF GI:15156521 GB:GENE:GENE ntrC LENGTH 483 SQ:AASEQ MTATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWVSAGEGDLVVTDVVMPDENAFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIAIIGRALSEPKRKPAKLDDDMQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIGDMPMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLNVVPLRLPPLRDRAEDIPDLVRHFIQTGEKEGLEGKRFETEALEVMKAYAWPGNVRELENLIRRLMALYPQEVITREIIEQELQSDVPDSPLDKMAVRTGSLTISQAVEENMRDYFASFGDGLPPPGLYDRVLRELEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIRELGVSVYRSSRPS GT:EXON 1|1-483:0| SW:ID NTRC_RHIME SW:DE RecName: Full=Nitrogen assimilation regulatory protein; SW:GN Name=ntrC; OrderedLocusNames=R01459; ORFNames=SMc01043; SW:KW Activator; ATP-binding; Complete proteome; DNA-binding;Nitrogen fixation; Nucleotide-binding; Phosphoprotein; Repressor;Transcription; Transcription regulation;Two-component regulatory system. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 3->481|NTRC_RHIME|0.0|91.9|479/484| GO:SWS:NREP 7 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0003677|"GO:DNA binding"|DNA-binding| GO:SWS GO:0009399|"GO:nitrogen fixation"|Nitrogen fixation| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006350|"GO:transcription"|Transcription| GO:SWS GO:0045449|"GO:regulation of transcription"|Transcription regulation| GO:SWS GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|Two-component regulatory system| PROS 162->175|PS00675|SIGMA54_INTERACT_1|PDOC00579| PROS 224->239|PS00676|SIGMA54_INTERACT_2|PDOC00579| PROS 350->359|PS00688|SIGMA54_INTERACT_3|PDOC00579| SEG 303->312|plrlpplrdr| BL:PDB:NREP 2 BL:PDB:REP 5->373|3dzdA|1e-69|39.8|362/366| BL:PDB:REP 377->475|1etoB|8e-12|37.2|94/94| RP:PDB:NREP 2 RP:PDB:REP 23->381|1e32A|1e-58|13.3|347/438| RP:PDB:REP 433->479|3e7lD|4e-07|25.5|47/63| RP:PFM:NREP 3 RP:PFM:REP 5->114|PF00072|2e-15|38.2|110/111|Response_reg| RP:PFM:REP 138->302|PF00158|3e-61|64.2|165/168|Sigma54_activat| RP:PFM:REP 432->471|PF02954|3e-04|47.5|40/42|HTH_8| HM:PFM:NREP 3 HM:PFM:REP 138->304|PF00158|2.1e-73|59.9|167/168|Sigma54_activat| HM:PFM:REP 5->114|PF00072|1.1e-26|32.7|110/112|Response_reg| HM:PFM:REP 432->472|PF02954|3.8e-17|46.3|41/42|HTH_8| GO:PFM:NREP 9 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0005524|"GO:ATP binding"|PF00158|IPR002078| GO:PFM GO:0005622|"GO:intracellular"|PF00158|IPR002078| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00158|IPR002078| GO:PFM GO:0008134|"GO:transcription factor binding"|PF00158|IPR002078| GO:PFM GO:0003700|"GO:transcription factor activity"|PF02954|IPR002197| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF02954|IPR002197| RP:SCP:NREP 2 RP:SCP:REP 2->114|1oxbB|6e-16|19.5|113/124|c.23.1.1| RP:SCP:REP 88->465|1hn0A1|5e-47|10.4|356/384|a.102.3.2| HM:SCP:REP 2->183|1s8nA_|4.2e-40|39.9|173/190|c.23.1.1|1/1|CheY-like| HM:SCP:REP 137->382|1ny5A2|8.1e-77|41.5|246/247|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 350->475|1etoB_|8.7e-22|42.9|98/98|a.4.1.12|1/1|Homeodomain-like| OP:NHOMO 9692 OP:NHOMOORG 883 OP:PATTERN -----------------------------1--------------1-11-1----1-1----------- CTX1313233322332222-24112422222284443656326512212222323133--342153665622111433-377263A99FFFE2D331--54947BX6K9A111111111111111435963699A5GEDJG534J1KCFCCC7779B324444C955ECN835333334333344212111B2BHHHHHFFHDIFGIHFII88AAGIL6ADBC76867878fL444444444444444222226212343221244332222323-1114543323-1144444444444-111111111111-1133211144NP7WIIHLLJLFHC2UEE82339D71-F5C83oiHOJ95DB7D9D5233MKHA77943333GDONMC79JMEFI7756667677B-FEDDFEFE9E82G88DAECGGDDDGS677B8GGCGF7AC55555555B6565CBH11111111--112211222222222111126BE97CDB9HVWWWYUNHHHHTTZZKKJJDJYXYTbXT22KOJSPDDDLNKRLDEIMGKCFF933222226B9NWPE**ZNQnZGnZiio6pjooegqPXjlmoy*Ok1434111111313111221154224FEJGEHIENEGHAMGHGGGLIOMLJNIHJJNN--3FLBM------LCDGD99IHHKIIKMII-HLIHKIIIHJHHJIIHHIHMLMEDAB8HEFGFHIIHIHFJFGGCDBAFEFE8-ABBCDCCBADED---B222224444F6TDQ222423233332224877785A463YBYYWZVaeWVZcaVMZWT11-1-21-19BGHRIIIJIJQLONACB8A888893444--L388777711111111521-------------------------26433465458I4 -1--11-----------------------------------------------------------------------------------------------1--------------------------------------------------------4-----------3--4--121------369D-221-3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 482 STR:RPRED 99.8 SQ:SECSTR EEHEEEEEcccHHHHHHHHHHHcEEEEEEcTTccccccEEEEEcGGGTTTccccHHHHTHHHHHTTccEEEETTcEEEEEETTEEEEEEEEEEccccEEEEcTTcccccccccccccTTcccTTcccGGGcccccHHHHHHHHHHHcHHHHHHcccccccEEEEEccTTccHHHHHHHHHHHGGHHTTcEEEEEcHHHHTTccTTHHHHHHHHHHHTcccHHHHHHHHTccEEEEEccGGGTccHHHHcccTTHHHHHHHHHHHHHTccccccEEEEEEEccGGGccGGGTcTTcccEEEEcccccHHHHHHHHHHTTTTccccTTcHHHHHHcTTccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHccccHHccTcEEEccHHHHTTcccccccccccEEccGGGccGGGcccccccHHHHccHHHHHTccccccHHHHHHHHHHHHHTcccccHHHHHHHHHcTHHHHTccH# DISOP:02AL 116-138, 389-403, 474-483| PSIPRED cccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHcccccccccccccccccHHEEccccEEEEEcHHcccHHHHHHHHHHHHccEEEEEcccEEEEEEEEEEEcccccHHHHHHcccccHHHHHHHccEEEEEcccccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHccccccccccc //