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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : nwsB.1
DDBJ      :nwsB         two component response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  450/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:202 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->194 1yioA PDBj 6e-25 33.2 %
:RPS:PDB   5->199 3c3wB PDBj 2e-18 23.6 %
:RPS:SCOP  5->119 1p2fA2  c.23.1.1 * 1e-16 23.2 %
:RPS:SCOP  155->199 1fseF  a.4.6.2 * 2e-09 22.2 %
:HMM:SCOP  2->175 1s8nA_ c.23.1.1 * 2.2e-26 28.9 %
:RPS:PFM   5->115 PF00072 * Response_reg 3e-13 34.2 %
:RPS:PFM   155->193 PF00196 * GerE 2e-05 41.0 %
:HMM:PFM   5->115 PF00072 * Response_reg 6e-26 36.0 111/112  
:HMM:PFM   139->194 PF00196 * GerE 2.8e-19 46.4 56/58  
:BLT:SWISS 2->199 FIXJ_AZOC5 4e-27 33.3 %
:PROS 155->182|PS00622|HTH_LUXR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86921.1 GT:GENE nwsB.1 GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1108103..1108711 GB:FROM 1108103 GB:TO 1108711 GB:DIRECTION + GB:GENE nwsB GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK86921.1 GB:DB_XREF GI:15156149 GB:GENE:GENE nwsB LENGTH 202 SQ:AASEQ MTLPVYLVDDDDAVRKALILLLSTVGIKAKGFADPVVFLGQLPALEPGCLIFDIRMPAITGLKLQEKLAEEGVDWPVIVISGHGNIEACRRAFHNGAVDFLSKPVDEQDLIDAIQKAHRILASTLDAKALHAETRALLALLTAREREILERIALGFTSRQIADGLGLSPRTVDSHRAAIGLKLGTTSQAEMTRLWLEAGADQ GT:EXON 1|1-202:0| BL:SWS:NREP 1 BL:SWS:REP 2->199|FIXJ_AZOC5|4e-27|33.3|198/211| PROS 155->182|PS00622|HTH_LUXR_1|PDOC00542| SEG 129->154|alhaetrallalltarereilerial| BL:PDB:NREP 1 BL:PDB:REP 5->194|1yioA|6e-25|33.2|190/198| RP:PDB:NREP 1 RP:PDB:REP 5->199|3c3wB|2e-18|23.6|195/210| RP:PFM:NREP 2 RP:PFM:REP 5->115|PF00072|3e-13|34.2|111/111|Response_reg| RP:PFM:REP 155->193|PF00196|2e-05|41.0|39/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 5->115|PF00072|6e-26|36.0|111/112|Response_reg| HM:PFM:REP 139->194|PF00196|2.8e-19|46.4|56/58|GerE| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 5->119|1p2fA2|1e-16|23.2|112/120|c.23.1.1| RP:SCP:REP 155->199|1fseF|2e-09|22.2|45/50|a.4.6.2| HM:SCP:REP 2->175|1s8nA_|2.2e-26|28.9|173/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 1382 OP:NHOMOORG 452 OP:PATTERN -------------------------------------------------------------------- 393-------1------11-1---11111111----1-11----------------------11----------------1--------------------1--11112-------------------------1-22211---2-2--4------------1--112-4-------------111---------------1---1----1----1----1----------18-----------------------------------------------------------------------------------------1121------------2---------1-------112111--11---21--6524222-----22C465437447422222222224-37536337249-67729767C698A71224364444235--------111-1413--111111-----1----------------14421343249669764444488A844443447546462344468534557883238543345111-1-----66B-A741477-58557-36655482565966325------------------------122312142313325444412445445433452---4313------12111111112122211-1111122111111111112111112242223222222222232211111111-211111111111----11111111141634---1--------112--111111--5266665685587A85555---------2-2254444446456112-1--2221111111-111111111-1---1----------------------------1----------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------3---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 200 STR:RPRED 99.0 SQ:SECSTR cccEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHGGGcHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTc## DISOP:02AL 123-141| PSIPRED ccEEEEEEEcHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHccccc //