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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : pdxA.1
DDBJ      :pdxA         pyridoxal phosphate biosynthesis protein
Swiss-Prot:PDXA_AGRT5   RecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase;         EC=1.1.1.262;AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase;

Homologs  Archaea  2/68 : Bacteria  541/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.77.1
:340 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->337 1ps6A PDBj 1e-63 41.3 %
:RPS:PDB   7->331 2cmjA PDBj 1e-44 10.2 %
:RPS:SCOP  8->337 1ps6A  c.77.1.3 * e-106 39.4 %
:HMM:SCOP  4->337 1r8kA_ c.77.1.3 * 4.4e-106 50.3 %
:RPS:PFM   39->329 PF04166 * PdxA 1e-60 51.0 %
:HMM:PFM   37->330 PF04166 * PdxA 2.9e-104 46.0 289/299  
:BLT:SWISS 1->340 PDXA_AGRT5 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86910.2 GT:GENE pdxA.1 GT:PRODUCT pyridoxal phosphate biosynthesis protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1092629..1093651) GB:FROM 1092629 GB:TO 1093651 GB:DIRECTION - GB:GENE pdxA GB:PRODUCT pyridoxal phosphate biosynthesis protein GB:PROTEIN_ID AAK86910.2 GB:DB_XREF GI:159139913 GB:GENE:GENE pdxA LENGTH 340 SQ:AASEQ MTHASLPLALTQGDPAGIGPDIAINAWAKRRENGVPPFIFIGDPDVVASRAALIGVPVNIETCDPESAVSLFERAFPILPLPVGFDVQAGQPHVGAAHATIKAIEMAVSLTVEGRAAAVVTNPIAKSVLYEAGFGFPGHTEFLADLALRQTGKPVTPVMMIAGPKVRVVPVTIHIPIKDVPTALTEELIVTTCRIIDTDLREKFGIAAPRLAVAGLNPHAGEDGALGTEDRDVVHPATIRLRKDGIDAFGPLPADTMFHDAARKRYDVAVCMYHDQALIPAKALGFDDSVNVTLGLPFIRTSPDHGTAFGIAGQGIASETSLVAALKMAAEIYARSRVGA GT:EXON 1|1-340:0| SW:ID PDXA_AGRT5 SW:DE RecName: Full=4-hydroxythreonine-4-phosphate dehydrogenase; EC=1.1.1.262;AltName: Full=4-(phosphohydroxy)-L-threonine dehydrogenase; SW:GN Name=pdxA; OrderedLocusNames=Atu1104; ORFNames=AGR_C_2043; SW:KW Cobalt; Complete proteome; Cytoplasm; Magnesium; Metal-binding; NAD;NADP; Oxidoreductase; Pyridoxine biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->340|PDXA_AGRT5|0.0|100.0|340/340| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0008615|"GO:pyridoxine biosynthetic process"|Pyridoxine biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 8->337|1ps6A|1e-63|41.3|322/328| RP:PDB:NREP 1 RP:PDB:REP 7->331|2cmjA|1e-44|10.2|313/410| RP:PFM:NREP 1 RP:PFM:REP 39->329|PF04166|1e-60|51.0|286/298|PdxA| HM:PFM:NREP 1 HM:PFM:REP 37->330|PF04166|2.9e-104|46.0|289/299|PdxA| GO:PFM:NREP 4 GO:PFM GO:0008615|"GO:pyridoxine biosynthetic process"|PF04166|IPR005255| GO:PFM GO:0050570|"GO:4-hydroxythreonine-4-phosphate dehydrogenase activity"|PF04166|IPR005255| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF04166|IPR005255| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04166|IPR005255| RP:SCP:NREP 1 RP:SCP:REP 8->337|1ps6A|e-106|39.4|322/329|c.77.1.3| HM:SCP:REP 4->337|1r8kA_|4.4e-106|50.3|326/327|c.77.1.3|1/1|Isocitrate/Isopropylmalate dehydrogenase-like| OP:NHOMO 666 OP:NHOMOORG 546 OP:PATTERN -----------------1----------------------------------------------1--- --1----------------------------------121----1-------111--------1--2---------------1111111111-111---11111111112---------------11111111111----------1111111111111111111111111111111111111-------1------------------21211------1-1---------1-------------------------------------------------------------------------------------------11--11-1111-1-1---1-----1--3-11-11------11-1--11-111111111111113111111211111111111112-1111151211212221224222332111121121221121111111123211111-----------------------------112111222223332322111122121111112122132-1121111113122221111111111111111111111111111-2-1-111-111111111111111-11--1111111111111111111111111121111111111111111111111111111--1111------1-321111112122211-11111211111211111112332311121222222222222221111111111111111111111111111111111111121---3-2------11111111111111122221111111111121---------11111111111111111111111111111111-111111----------------------------------------------121 --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 335 STR:RPRED 98.5 SQ:SECSTR ####ccEEEEEEccTTHHHHHHHHHHHHHHHHHHTTTTEEEEEEEccHHHHHHTTTHHEEEEEEHHHHHHHHHHHcEEEEcccccccHHHHHHHTcccccccHHHHHHHHHccEEEEEEcccTTcccccTTccccEEEEEEcccGGGGcEcccEEEEEEEccccccccEEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHHHHTccEEEEEcTTTcTTHHHHHHHHHHHHHHHHTHHHHHHTTccEEEEEHHHHHHHHHHccEEEEEcHHHHHHHHHHTcTTcEEEEEEcTTcccEEEEccccccHHTTcccccccHHHHHHHHHHHHTTccEEcc# DISOP:02AL 1-4,8-8,338-341| PSIPRED cccccccEEEEccccccccHHHHHHHHccccHHccccEEEEEcHHHHHHHHHHHccccEEEEcccHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHcccccccHHHHHHHHHccccccccEEEEEEccccEEEEEEEccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHcccEEEcccccHHHccHHHHccccEEEEcccccHHHHHHHHHccccEEEEEEccEEEEcccccccHHccccccccHHHHHHHHHHHHHHHHHHcccc //