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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : pdxH
DDBJ      :pdxH         pyridoxamine 5'-phosphate oxidase
Swiss-Prot:PDXH_AGRT5   RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase;         EC=1.4.3.5;AltName: Full=PNP/PMP oxidase;         Short=PNPOx;AltName: Full=Pyridoxal 5'-phosphate synthase;

Homologs  Archaea  0/68 : Bacteria  481/915 : Eukaryota  158/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:206 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->206 1g76A PDBj 2e-43 43.9 %
:RPS:PDB   6->206 1ci0B PDBj 4e-46 39.2 %
:RPS:SCOP  14->206 1wv4A  b.45.1.1 * 2e-51 42.8 %
:HMM:SCOP  15->206 2a2jA1 b.45.1.1 * 8.9e-69 47.0 %
:RPS:PFM   41->111 PF01243 * Pyridox_oxidase 2e-08 39.4 %
:RPS:PFM   164->206 PF10590 * PNPOx_C 2e-06 50.0 %
:HMM:PFM   25->111 PF01243 * Pyridox_oxidase 1.7e-29 39.1 87/89  
:HMM:PFM   164->206 PF10590 * PNPOx_C 6.7e-19 50.0 42/42  
:BLT:SWISS 1->206 PDXH_AGRT5 e-121 100.0 %
:PROS 174->187|PS01064|PYRIDOX_OXIDASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86569.1 GT:GENE pdxH GT:PRODUCT pyridoxamine 5'-phosphate oxidase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 756990..757610 GB:FROM 756990 GB:TO 757610 GB:DIRECTION + GB:GENE pdxH GB:PRODUCT pyridoxamine 5'-phosphate oxidase GB:PROTEIN_ID AAK86569.1 GB:DB_XREF GI:15155733 GB:GENE:GENE pdxH LENGTH 206 SQ:AASEQ MSETGLTSSDFTEENEPFALFAEWLKDATASEINDPNAVALATVDENGLPNVRMVLLKGVDDRGFVFYTNFESQKGQEILGQKKAAMCFHWKSLRRQVRLRGEVEIVSDEEADAYYASRPRGSRIGAWASKQSRPLEGRFALEKAVAEYTARYAIGEIPRPSHWSGFRIRPVSIEFWHDRKFRLHDRIEFRRETPDGAWSKVRMYP GT:EXON 1|1-206:0| SW:ID PDXH_AGRT5 SW:DE RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase; EC=1.4.3.5;AltName: Full=PNP/PMP oxidase; Short=PNPOx;AltName: Full=Pyridoxal 5'-phosphate synthase; SW:GN Name=pdxH; OrderedLocusNames=Atu0760; ORFNames=AGR_C_1381; SW:KW Complete proteome; Flavoprotein; FMN; Oxidoreductase;Pyridoxine biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->206|PDXH_AGRT5|e-121|100.0|206/206| GO:SWS:NREP 3 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0008615|"GO:pyridoxine biosynthetic process"|Pyridoxine biosynthesis| PROS 174->187|PS01064|PYRIDOX_OXIDASE|PDOC00815| BL:PDB:NREP 1 BL:PDB:REP 16->206|1g76A|2e-43|43.9|189/199| RP:PDB:NREP 1 RP:PDB:REP 6->206|1ci0B|4e-46|39.2|199/204| RP:PFM:NREP 2 RP:PFM:REP 41->111|PF01243|2e-08|39.4|71/88|Pyridox_oxidase| RP:PFM:REP 164->206|PF10590|2e-06|50.0|42/42|PNPOx_C| HM:PFM:NREP 2 HM:PFM:REP 25->111|PF01243|1.7e-29|39.1|87/89|Pyridox_oxidase| HM:PFM:REP 164->206|PF10590|6.7e-19|50.0|42/42|PNPOx_C| GO:PFM:NREP 3 GO:PFM GO:0010181|"GO:FMN binding"|PF01243|IPR011576| GO:PFM GO:0016638|"GO:oxidoreductase activity, acting on the CH-NH2 group of donors"|PF10590|IPR019576| GO:PFM GO:0055114|"GO:oxidation reduction"|PF10590|IPR019576| RP:SCP:NREP 1 RP:SCP:REP 14->206|1wv4A|2e-51|42.8|145/162|b.45.1.1| HM:SCP:REP 15->206|2a2jA1|8.9e-69|47.0|185/0|b.45.1.1|1/1|FMN-binding split barrel| OP:NHOMO 709 OP:NHOMOORG 639 OP:PATTERN -------------------------------------------------------------------- ----1---------21111-1111111111111111131211112212-11--11--1--111-1112221-----------1-----111--111---11111111111------------------------1-1--11----11111111----------111-111--1-----1----111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111111111111111111111111111111111-11111111111111111111111111111112111111111111111111111111111111111---------------1-111111111111111111121111111111111121111111111211111111111111----111111111------1-----------------------111111--1------------------------111111111111111111211111111111111-1-11-------11111111111111111-11111111111111111111112111111111111111111111111111111111111111111111-111112322-111111111111111----1-111111111133331111111111111---------2111111111111111111121111111111--111111----------------------------------------------121 ----111-----221111111122121---11111111-1-1-1111111221211111111111111-1111111111111111111-13111111111111----1-2212121111111111-111281-112111121111-111-11-11--1132-1211231212121111-----111132111------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 205 STR:RPRED 99.5 SQ:SECSTR #ccccccGGGccHHccHHHHHHHHHHHHHHcccccTTEEEEEEEETTTEEEEEEEEccEEccccEEEEEccccHHHHHHHHccEEEEEEEETTTTEEEEEEEEEEEccHHHHHHHHHHccHHHHHHHHHccTTcccccHHHHHHHHHHHHHHTTcccccccTTEEEEEEEEEEEEEEEccTTcccEEEEEEcccTTcccEEEEccc DISOP:02AL 1-4| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEEcccccccEEEEEEEEEccccEEEEEccccHHHHHHHHcccEEEEEEcHHHcEEEEEEEEEEEccHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHHHHccccccccccccEEEEEEEEEEEEEcccccccEEEEEEEEEcccccEEEEEEcc //