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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : pdxK
DDBJ      :pdxK         pyridoxamine kinase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  257/915 : Eukaryota  149/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:291 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->255 1lhrA PDBj 7e-30 32.1 %
:RPS:PDB   6->257 2ddwB PDBj 5e-39 29.3 %
:RPS:SCOP  9->286 1lhpA  c.72.1.5 * 1e-44 28.2 %
:HMM:SCOP  6->283 1lhpA_ c.72.1.5 * 5.4e-55 32.5 %
:RPS:PFM   80->257 PF08543 * Phos_pyr_kin 1e-13 35.1 %
:HMM:PFM   79->259 PF08543 * Phos_pyr_kin 1.6e-16 29.0 176/246  
:BLT:SWISS 9->257 PDXY_GRABC 7e-35 36.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88220.2 GT:GENE pdxK GT:PRODUCT pyridoxamine kinase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2456221..2457096 GB:FROM 2456221 GB:TO 2457096 GB:DIRECTION + GB:GENE pdxK GB:PRODUCT pyridoxamine kinase GB:PROTEIN_ID AAK88220.2 GB:DB_XREF GI:159140499 GB:GENE:GENE pdxK LENGTH 291 SQ:AASEQ MQENTQGAVIVISSHVMRGSVGNRAAVFALETLGYPVWAVPTIVMPWHPGHGPSTRMRFQDDDFDKAMTDLGNAQWIGEVKAVLTGYFGSAAQVRSVARLIRNLKEKNPALVYACDPVMGDLGGLYIPLETAEAIRDHLIPLATVATPNRYELAWMSGAELETNNAIMDAALALGPPKMLVTSAVPMMTGGTGNLYLSGRHALLAEHRAIENAPNGLGDLMSALFLARLLEGVDDEKALQLATASVFEILARTKKRGMNELTLETDSSSLSTPMAMVQMRHLLHPSRSKRK GT:EXON 1|1-291:0| BL:SWS:NREP 1 BL:SWS:REP 9->257|PDXY_GRABC|7e-35|36.4|247/286| SEG 260->272|eltletdssslst| BL:PDB:NREP 1 BL:PDB:REP 9->255|1lhrA|7e-30|32.1|246/305| RP:PDB:NREP 1 RP:PDB:REP 6->257|2ddwB|5e-39|29.3|242/261| RP:PFM:NREP 1 RP:PFM:REP 80->257|PF08543|1e-13|35.1|171/245|Phos_pyr_kin| HM:PFM:NREP 1 HM:PFM:REP 79->259|PF08543|1.6e-16|29.0|176/246|Phos_pyr_kin| RP:SCP:NREP 1 RP:SCP:REP 9->286|1lhpA|1e-44|28.2|277/306|c.72.1.5| HM:SCP:REP 6->283|1lhpA_|5.4e-55|32.5|277/309|c.72.1.5|1/1|Ribokinase-like| OP:NHOMO 538 OP:NHOMOORG 406 OP:PATTERN -------------------------------------------------------------------- -----111111---------------------------------1------1--------1111------------------1-----111--------------------------------------------------------------1-----------------------------111-----------------------------------------------------------------------11----1--11-1----1-111----------------------------------------------------------------11---------1---------------------1111------11-----1-1--11111111112-1111111111--1111-1111111111-1--21-11-----------1---1112-----------------------------------111111111111111-1111111111111---1-------1--1--------------------------------------------------------------------------------------22----------------1------1---1--1----------21111312222222222-222222222222222222222211111222212222222222221122222--1111111-1111------------------111111--11-1111------------11111111-1111-111111111111-1111-----12-111111111111---------------------------1----------------------------------- ----111-211---11---1-------1111111--11111--11111111-1-111-1-1112222222222222212222221222-111-11211111-111--13121122331-1--1132-21481-4---1111-11--111-1--3111112221311-1111121111119---112111-111111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 96.2 SQ:SECSTR ###cccccccccccccccccccHHHHHHHHHHTTccccccccEEEccccccccccEEEccHHHHHHHHHHHHHHTccTTccEEEcccccccHHHHHHHHHHHHHTTTcTTcEEEEccccccTTTEcccTcHHHHHHHTTTTTccEEcccHHHHHHHHTcccccHHHHHHHHccccccEEEEEccEEcccEEccEEEEETTEEEccccEEcccccccHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHTTcHHHcTTccccTTTTccccGGGHHHH######## DISOP:02AL 1-4,287-292| PSIPRED ccccccccEEEEEcccccccccHHEEHHHHHccccEEEEEEEEEEcccccccccccccccHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHHHHHHHHHcccEEEccHHHHHHHHccccccHHHHHHHHHHHcccEEEEEEEEcccccccEEEEEEccEEEEEEccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHccccccccc //