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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : pecS
DDBJ      :pecS         transcriptional regulator, MarR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  253/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:161 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->161 2fbkA PDBj 9e-16 31.1 %
:RPS:PDB   25->161 2a61A PDBj 8e-20 23.1 %
:RPS:SCOP  2->161 2fbkA1  a.4.5.28 * 5e-43 35.9 %
:HMM:SCOP  11->161 2fbkA1 a.4.5.28 * 8.3e-35 38.4 %
:HMM:PFM   49->110 PF01047 * MarR 3.4e-17 39.0 59/59  
:BLT:SWISS 4->154 PECS_DICD3 6e-31 43.0 %
:PROS 84->118|PS01117|HTH_MARR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86088.2 GT:GENE pecS GT:PRODUCT transcriptional regulator, MarR family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(268711..269196) GB:FROM 268711 GB:TO 269196 GB:DIRECTION - GB:GENE pecS GB:PRODUCT transcriptional regulator, MarR family GB:PROTEIN_ID AAK86088.2 GB:DB_XREF GI:159139569 GB:GENE:GENE pecS LENGTH 161 SQ:AASEQ MDHVDHILAQWRKERPDLDVGPMGLLGRLHRLSTYLGREVEAVLLKHGLSSSAFDVLATLRRAGSPYQLSPGDLLAMTMVSSGTMTNRIDQLEKAGLVERIHNPQDRRSVLISLTERGFAIVEEAVGAHVDNQHRLVAHLSEEERDTLDGLLKRFLQDFEE GT:EXON 1|1-161:0| BL:SWS:NREP 1 BL:SWS:REP 4->154|PECS_DICD3|6e-31|43.0|151/166| PROS 84->118|PS01117|HTH_MARR_1|PDOC00861| BL:PDB:NREP 1 BL:PDB:REP 4->161|2fbkA|9e-16|31.1|151/156| RP:PDB:NREP 1 RP:PDB:REP 25->161|2a61A|8e-20|23.1|134/142| HM:PFM:NREP 1 HM:PFM:REP 49->110|PF01047|3.4e-17|39.0|59/59|MarR| RP:SCP:NREP 1 RP:SCP:REP 2->161|2fbkA1|5e-43|35.9|153/156|a.4.5.28| HM:SCP:REP 11->161|2fbkA1|8.3e-35|38.4|151/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 331 OP:NHOMOORG 253 OP:PATTERN -------------------------------------------------------------------- ----72---------------2--11------1223-423-111111122212--1-1--11313134541---------------------------------------------------------------1---------1-1------1111-------1-1-1--------------121-------1-------1--1------2232---1-----1------12------------------------------------------1---1112111111------------------------1--------1----1------1--------11-----1-------1--------------1--------------1------1--------------11-111---2--211111222121------12-----11--------------1---------------------------------1-12111-22212211111---111111113-2-2---1-2-----2-----11--1223--------------------1---1----111--11--1--11---1--------------------------111--------2111111-111121-111--------------1132-1-1111111111-111111111111111111-11111---1111111111111111-1111111-----------------------------2-----------------------------------1-1---1-----------------11111121122------------------11---------------------------------1-----------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 158 STR:RPRED 98.1 SQ:SECSTR ###HHHHHcTTcccHHHHTTcHccHHHHHHHHHHHHHHHHHTTHHHHTccHHHHHHHHHHHHHccEEHccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHH DISOP:02AL 1-1,159-162| PSIPRED ccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcc //