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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : phaD
DDBJ      :phaD         pH adaption potassium efflux system protein
Swiss-Prot:             

Homologs  Archaea  40/68 : Bacteria  622/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
:547 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   137->434 PF00361 * Oxidored_q1 3e-14 33.7 %
:HMM:PFM   139->432 PF00361 * Oxidored_q1 6.5e-34 26.1 264/270  
:HMM:PFM   29->86 PF09973 * DUF2208 0.00024 24.1 58/233  
:BLT:SWISS 26->541 PHAD_RHIME e-143 54.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86324.2 GT:GENE phaD GT:PRODUCT pH adaption potassium efflux system protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(498246..499889) GB:FROM 498246 GB:TO 499889 GB:DIRECTION - GB:GENE phaD GB:PRODUCT pH adaption potassium efflux system protein GB:PROTEIN_ID AAK86324.2 GB:DB_XREF GI:159139665 GB:GENE:GENE phaD LENGTH 547 SQ:AASEQ MSFPFHIVVAPILLPLITAALLLFFDERQRVAKAAISFTSTVLLLIVAILLFREVNSTVNTEIAAVVSSGVYLLGNWPAPFGIVLVADRLSGLMVLLTALLAIPSLIYSMAKWHKSGAHFHSLFQMMLMGVNGAFLTGDLFNLFVFFEVMLAASYGLLLHGSGQQRVKAGLHYIAINLVAALFFLIGVSLIYGVTGTLNMGDLAHRIEGLNPDQRMLLETGAAILGIAFLVKAGMWPLNFWLPSAYGAASAPVGGLFAIMSKVGIYVIARLSFLLFGQTAGESAGFGHDALLVGGIATIIFGAIGVLASQALGRLAGFSVLVSSGTLLAAMGTGNPTVAAGALYYMVSSTLTISAFFMLIELVERGQDAGANVLAVTMEAYGEGEEEDEEEEVGVTMPATIAVLGACFAACGILLAGLPPLSGFIAKFSMLTAILNPSGLGANDSVSTLSWWLVFLIVFAGFASLVSMTRAGIRTFWASIEGTVPRVLVIEIAPIMLLLGLTLAMTIQAGPVMRYMQETARILDLPASYIQGVISAPRAGSNPEAEP GT:EXON 1|1-547:0| BL:SWS:NREP 1 BL:SWS:REP 26->541|PHAD_RHIME|e-143|54.1|512/539| TM:NTM 12 TM:REGION 4->26| TM:REGION 41->63| TM:REGION 85->107| TM:REGION 129->151| TM:REGION 171->193| TM:REGION 215->237| TM:REGION 253->275| TM:REGION 289->310| TM:REGION 313->333| TM:REGION 403->425| TM:REGION 449->471| TM:REGION 485->507| SEG 10->23|apillplitaalll| SEG 294->305|ggiatiifgaig| SEG 382->395|gegeeedeeeevgv| RP:PFM:NREP 1 RP:PFM:REP 137->434|PF00361|3e-14|33.7|264/268|Oxidored_q1| HM:PFM:NREP 2 HM:PFM:REP 139->432|PF00361|6.5e-34|26.1|264/270|Oxidored_q1| HM:PFM:REP 29->86|PF09973|0.00024|24.1|58/233|DUF2208| GO:PFM:NREP 3 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00361|IPR001750| GO:PFM GO:0042773|"GO:ATP synthesis coupled electron transport"|PF00361|IPR001750| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00361|IPR001750| OP:NHOMO 1359 OP:NHOMOORG 666 OP:PATTERN --31312---------11------333333541--11-111111-1-1-3535-52463851----22 233-12122221122--11-12--131111112121232212111213421-111131--131--313453-----------331-3---121---1-----11-3-231--------------131242441233344331133136334464544212-1365124443-3112222-112222----2-31-----1--1--111-421112---3123412222222--12222222222222222222----------------------------------------------------------------------14--3----------2--------31--3--115542--121211111--432111222322121213323433333333333332-33233243214-13341463325612243333333312211111111222-113622222111331111112121-21122333112-2-311121111111111111111111111121111-2-1-2-2112313123323222-11111111323211112-521-133224-323234419111114-2-23-1-------2-------1132211223-3-11-11------23-----233-642--4315------21--1112222222222-2222222222222222223111-13212222222222212122122222321-211111111111-11522222111131121----3----------333332311121333322223222232231111111112----11111-----22111111111111232-221111------------------------------------242222-22115- --------------------------------------------------------1----------------------------------------11-------------------------2-------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,536-548| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHHccccccccccccc //