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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : phbA
DDBJ      :phbA         acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  631/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:393 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   4->393 1m1tA PDBj e-168 79.2 %
:RPS:PDB   5->393 1dluA PDBj 1e-79 80.5 %
:RPS:SCOP  5->269 1dluA1  c.95.1.1 * 3e-48 87.2 %
:RPS:SCOP  252->392 1bi5A2  c.95.1.2 * 4e-25 18.4 %
:HMM:SCOP  5->269 1qflA1 c.95.1.1 * 2.6e-85 44.2 %
:HMM:SCOP  271->393 1ulqA2 c.95.1.1 * 7e-46 60.2 %
:RPS:PFM   6->262 PF00108 * Thiolase_N 2e-63 58.6 %
:RPS:PFM   272->392 PF02803 * Thiolase_C 3e-25 55.4 %
:HMM:PFM   4->263 PF00108 * Thiolase_N 5.2e-111 59.2 260/264  
:HMM:PFM   271->391 PF02803 * Thiolase_C 1.9e-52 62.0 121/123  
:BLT:SWISS 1->393 THIL_ZOORA e-166 78.8 %
:PROS 86->104|PS00098|THIOLASE_1
:PROS 374->387|PS00099|THIOLASE_3
:PROS 339->355|PS00737|THIOLASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88484.1 GT:GENE phbA GT:PRODUCT acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2773879..2775060 GB:FROM 2773879 GB:TO 2775060 GB:DIRECTION + GB:GENE phbA GB:PRODUCT acetyl-CoA acetyltransferase; poly-beta-hydroxybutyrate biosynthesis GB:PROTEIN_ID AAK88484.1 GB:DB_XREF GI:15157993 GB:GENE:GENE phbA LENGTH 393 SQ:AASEQ MTLPSIVIASAARTAVGSFNGHFANTPAHELGATVISAVLERAGVAANEVDEVILGQVLMAGEGQNPARQAAMKAGIPQEATAFGINQLCGSGLRAVALGMQQIVTGDAAIIIAGGQESMSMAPHCAHLRGGVKMGDFKMIDTMMKDGLTDAFYGYPMGITAENIARQWQLSRDEQDQFAVASQNKAEAAQNAGRFTDEIVAFTVKGRKADIVIDADEHIRHGASLETMAKLRPAFDKEGTVTAGNASGLNDGAAATLLMSEQQAAKRGIKPLARIASWATAGVDPQIMGTGPIPASRKALAKAGWSINDIGLVEANEAFAAQSCAVVRELGLNPDIVNVNGGAIAIGHPIGASGARVLNTLIFEMRRRNVSRGLATLCIGGGMGVAMCIEAL GT:EXON 1|1-393:0| BL:SWS:NREP 1 BL:SWS:REP 1->393|THIL_ZOORA|e-166|78.8|392/392| PROS 86->104|PS00098|THIOLASE_1|PDOC00092| PROS 374->387|PS00099|THIOLASE_3|PDOC00092| PROS 339->355|PS00737|THIOLASE_2|PDOC00092| SEG 342->356|ggaiaighpigasga| BL:PDB:NREP 1 BL:PDB:REP 4->393|1m1tA|e-168|79.2|390/392| RP:PDB:NREP 1 RP:PDB:REP 5->393|1dluA|1e-79|80.5|389/389| RP:PFM:NREP 2 RP:PFM:REP 6->262|PF00108|2e-63|58.6|256/261|Thiolase_N| RP:PFM:REP 272->392|PF02803|3e-25|55.4|121/131|Thiolase_C| HM:PFM:NREP 2 HM:PFM:REP 4->263|PF00108|5.2e-111|59.2|260/264|Thiolase_N| HM:PFM:REP 271->391|PF02803|1.9e-52|62.0|121/123|Thiolase_C| GO:PFM:NREP 4 GO:PFM GO:0008152|"GO:metabolic process"|PF00108|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF00108|IPR002155| GO:PFM GO:0008152|"GO:metabolic process"|PF02803|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF02803|IPR002155| RP:SCP:NREP 2 RP:SCP:REP 5->269|1dluA1|3e-48|87.2|265/265|c.95.1.1| RP:SCP:REP 252->392|1bi5A2|4e-25|18.4|136/154|c.95.1.2| HM:SCP:REP 5->269|1qflA1|2.6e-85|44.2|265/0|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 271->393|1ulqA2|7e-46|60.2|123/0|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 3748 OP:NHOMOORG 854 OP:PATTERN 11-1--1222222221-12222133111--13-----------------------------2221--- 233473-41123339GE66-6C33BC666669DDDDCOQU294F23342111777346--89A-7699987-----------7----------------3-333232232--------------------------33344---311-12--1-----------1------------------75544---533444444443445444352233444464463111111172-333333333333333222311111111111--11111--1-122111-3222--------------3333333333333-11---1112-13221111111111-3332111-1-1-5-12-762516-151--1-11-5--C888-----32A782337986734444444435-22522824438-444354555655583635575555467--------511-1546------------1111-21--1--1----159F8-4A959888AA867887889A888878H9FBEF921896966AAA98CC7225----44-------221B764C46-----------544-7-2--44445513-----------1-1111111-------33-462534633333334733334353354---3411------43421345334544555-355444454434444544678733332333333333333333373323334--222222222222---3222223333-7537111----11-11-1-999896A56481AA9A7A79A97996666111111111-222433333553443344444445------2233233311111111--1-------------------------11111-1------ 11--334-42-15655567766666675657564445565355676555557796755565532422214223242212224444411-56454443433545A561544A9B54895555655AE4G3Eq5-A695555445545435454484685B35648544446745643261J1114244976854474734 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 100.0 SQ:SECSTR EcTTcEEEEEEEEcccEETTcTTTTccHHHHHHHHHHHHHHHHTccGGGccEEEEEccccTTccccHHHHHHHHTTccTTcEEEEEccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEEcTTccEEccccccccccccccEEHHHHHHTccTTTcccHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTTTcccEEEccccccEEEcccTTccTTccHHHHHTccccccTTcccccccccccEEEEEEEEEEEHHHHHHHTccccEEEEEEEEEEccGGGGGGTHHHHHHHHHHHHTccGGGccEEEEccccHHHHHHHHHHHcccGGGccTTccHHHHcccTTTHHHHHHHHHHHHHHHHTccEEEEEEEETTTEEEEEEEEcc PSIPRED ccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccHHHccEEEEEEEccccccccHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccHHHHHHcccccHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccccEEEcccccccccccHHHHHHccccccccccEEEcccccccccEEEEEEEcHHHHHHccccEEEEEEEEEEEEccHHHccccHHHHHHHHHHHHcccHHHccEEEEEccHHHHHHHHHHHccccHHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccEEEEEEEEc //