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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : phbC
DDBJ      :phbC         poly-beta-hydroxybutyrate synthase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  223/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
b.29.1c.69.1
:619 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   247->432 3c5lA PDBj 1e-41 15.2 %
:RPS:SCOP  133->235 1kitA2  b.29.1.8 * 5e-05 12.8 %
:RPS:SCOP  265->607 1ju3A2  c.69.1.21 * 7e-15 12.3 %
:HMM:SCOP  262->552 1k8qA_ c.69.1.6 * 3.3e-38 25.5 %
:RPS:PFM   132->301 PF07167 * PhaC_N 5e-44 50.3 %
:RPS:PFM   477->548 PF11339 * DUF3141 2e-04 27.8 %
:HMM:PFM   132->304 PF07167 * PhaC_N 5.3e-72 51.5 171/172  
:HMM:PFM   330->554 PF00561 * Abhydrolase_1 7.6e-11 18.6 199/231  
:BLT:SWISS 18->617 PHBC_RHIME 0.0 62.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87383.2 GT:GENE phbC GT:PRODUCT poly-beta-hydroxybutyrate synthase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1585294..1587153 GB:FROM 1585294 GB:TO 1587153 GB:DIRECTION + GB:GENE phbC GB:PRODUCT poly-beta-hydroxybutyrate synthase GB:PROTEIN_ID AAK87383.2 GB:DB_XREF GI:159140118 GB:GENE:GENE phbC LENGTH 619 SQ:AASEQ MAGVDGGAGKKGGKTPGFDASTAEAYLIRDPETFAINVARALENLGKAASEWLAPRERGEIPQASADPVTDLVKTLSDVAEYWMAEPKRSLEAQTHLLSSYYDLWTKSLAQFSNDADSPPENVAESGPAQRRSKRFADADWQTNPFFDFLLKAYQTTVGFADRMVTEADGLDEHTRTKALFYMRQVTEALSPANFVFTNPQVFRETVASSGANLVKGMAQLAEDVAAGNGHLKLRQTDYSKFVIGQNIAVTPGKVVAKSPLCEIIHYAPTTEKVFKPPLLIVPPWINKFYILDLNPQKSFVGWCLEQGHSVFMVSWINPDAGLANKGWDDYINEGIDFALDTIEERTGEKQINAIGYCVGGTLLSSALALHAQQGNERIRSATLLAAQTDFIHAGDLKVFIDEGQLAALDKHMQAVGYLDGSIMATVFNMLRASDLIWPYVVDNYLRGAEPLPFDLLYWNSDSTRVTAASHSFYLRNCYLENNLARGLMRVAGKRINLGDITIPVYDLATRDDHIAPAKSVFTGAALFGGTVEFVLGASGHIAGVINPPQLEKYQYWTGPSPSGDFEAWQAAATAHKGSWWMHWQNWIESQSTEKVKARKPGDGKRPVLGDAPGTYVLS GT:EXON 1|1-619:0| BL:SWS:NREP 1 BL:SWS:REP 18->617|PHBC_RHIME|0.0|62.2|593/611| SEG 3->17|gvdggagkkggktpg| SEG 363->370|llssalal| RP:PDB:NREP 1 RP:PDB:REP 247->432|3c5lA|1e-41|15.2|178/217| RP:PFM:NREP 2 RP:PFM:REP 132->301|PF07167|5e-44|50.3|165/169|PhaC_N| RP:PFM:REP 477->548|PF11339|2e-04|27.8|72/556|DUF3141| HM:PFM:NREP 2 HM:PFM:REP 132->304|PF07167|5.3e-72|51.5|171/172|PhaC_N| HM:PFM:REP 330->554|PF00561|7.6e-11|18.6|199/231|Abhydrolase_1| GO:PFM:NREP 2 GO:PFM GO:0008415|"GO:acyltransferase activity"|PF07167|IPR010941| GO:PFM GO:0042619|"GO:poly-hydroxybutyrate biosynthetic process"|PF07167|IPR010941| RP:SCP:NREP 2 RP:SCP:REP 133->235|1kitA2|5e-05|12.8|94/197|b.29.1.8| RP:SCP:REP 265->607|1ju3A2|7e-15|12.3|316/347|c.69.1.21| HM:SCP:REP 262->552|1k8qA_|3.3e-38|25.5|290/0|c.69.1.6|1/1|alpha/beta-Hydrolases| OP:NHOMO 365 OP:NHOMOORG 232 OP:PATTERN ------------------------1--111------------------------------------11 --------------------------------------31------------------------------------------2-----------------------------------------------------11111-------11--1-----------1-----------------------------111111111111111------111-----------------------------------------------------------------------------------------------------------------------------------1-----------2--------------3112-----3242411222222------------12411312113-111111221111221212132222112--------2---2212-------------122--1--1--1-----2211-1111121121222122222322221223322231122122112122211214----11----------533--1-------------------------1------------------------------111-111-----------1------1--------531--------------------------------------------------------------------------------------------------2444--21----------------111111----2-2222222222222112--------------211111111111111111111------1-------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 318 STR:RPRED 51.4 SQ:SECSTR #########################################################################################################################################################################################################################################GcTTcccEEETTEHHHHHHHHHHHTcTTccccccGGGGccGGGcccccEEEEETTccEEEEcTTccEEEEEcTTccEEEEEGGGccGGGHHHHHHHHHHHHHcccTTTTcccccccHcccEEEEEEETTEEEEEETTccEEEEEEEEEETTTccEEEEETTTTEEEEEcTTcHHHHTTTcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHTccccccHHHHHHHTcHHHHHHHHHHHHHHHHTGGGcccTTHHHHTGGGGTTccEEEEETTcccccHHHHHHHHHHcTTcEEEEETTccccTTcHHHHHH#################################################################### DISOP:02AL 1-18,54-67,594-600,619-620| PSIPRED ccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEcccccccccccEEEEcccEEEEEEEccccccccccEEEEcccccccEEccccccccHHHHHHHccccEEEEEcccccHHHccccHHHHHHHHHHHHHHHHHHHcccccccEEEEcHHHHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHccccccccHHHHHHHHHHHHHccccccccEEEccEEEcHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEEcccEEEEEEcccccccccEEccccccccHHHHHHcccccccccHHHHHHHHHHHcccccccccccccccccccccccccccc //