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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : pheS
DDBJ      :pheS         phenylalanyl-tRNA synthetase, alpha-subunit
Swiss-Prot:SYFA_AGRT5   RecName: Full=Phenylalanyl-tRNA synthetase alpha chain;         EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase alpha chain;         Short=PheRS;

Homologs  Archaea  44/68 : Bacteria  900/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
a.2.7b.30.2d.104.1
:349 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   75->333 2rhsC PDBj 9e-60 47.0 %
:RPS:PDB   16->333 1eiyA PDBj 1e-42 34.7 %
:RPS:SCOP  16->37 1eiyA1  a.2.7.2 * 6e-08 31.8 %
:RPS:SCOP  76->332 1n9eA1  b.30.2.1 * 3e-32 9.2 %
:HMM:SCOP  1->88 1eiyA1 a.2.7.2 * 8.4e-21 46.8 %
:HMM:SCOP  82->337 1pysA_ d.104.1.1 * 1.7e-75 40.7 %
:RPS:PFM   16->76 PF02912 * Phe_tRNA-synt_N 2e-12 52.5 %
:RPS:PFM   91->330 PF01409 * tRNA-synt_2d 4e-68 52.7 %
:HMM:PFM   81->332 PF01409 * tRNA-synt_2d 4.1e-106 50.2 241/247  
:HMM:PFM   6->77 PF02912 * Phe_tRNA-synt_N 4.9e-27 45.8 72/73  
:BLT:SWISS 16->349 SYFA_AGRT5 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86074.2 GT:GENE pheS GT:PRODUCT phenylalanyl-tRNA synthetase, alpha-subunit GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 254470..255519 GB:FROM 254470 GB:TO 255519 GB:DIRECTION + GB:GENE pheS GB:PRODUCT phenylalanyl-tRNA synthetase, alpha-subunit GB:PROTEIN_ID AAK86074.2 GB:DB_XREF GI:159139562 GB:GENE:GENE pheS LENGTH 349 SQ:AASEQ MSEIAAAADEPAIEAVRVSALGKKGSVSELLKTLGSMTPEERQTRGAAINQLKTEITDLIGERKNALKDAAIAARLKAETVDVSLPVRQSPTERGRIHPISQIVDEITAIFADMGFSIAEGPDIETDYYNFTALNFPEGHPAREMHDTFFFQPDEKGERKVLRTHTSPVQIRTMESQKPPIRIVIPGKTYRQDSDATHSPMFHQVEGLVIDKKAHVGNLRWVLEEFCKTFFEVDSVVMRFRPSFFPFTEPSFEVDIQCDRSGPIVKFGEGKDWMEILGCGMVHPNVLRAGGLDPDEYQGFAWGMGLDRIAMLKYGMPDLRDFFNADVRWMNHYGFRPLDMPTLFGGLSV GT:EXON 1|1-349:0| SW:ID SYFA_AGRT5 SW:DE RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS; SW:GN Name=pheS; OrderedLocusNames=Atu0258; ORFNames=AGR_C_443; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 16->349|SYFA_AGRT5|0.0|100.0|334/360| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 3->15|eiaaaadepaiea| SEG 239->253|rfrpsffpftepsfe| BL:PDB:NREP 1 BL:PDB:REP 75->333|2rhsC|9e-60|47.0|251/271| RP:PDB:NREP 1 RP:PDB:REP 16->333|1eiyA|1e-42|34.7|314/345| RP:PFM:NREP 2 RP:PFM:REP 16->76|PF02912|2e-12|52.5|61/73|Phe_tRNA-synt_N| RP:PFM:REP 91->330|PF01409|4e-68|52.7|224/229|tRNA-synt_2d| HM:PFM:NREP 2 HM:PFM:REP 81->332|PF01409|4.1e-106|50.2|241/247|tRNA-synt_2d| HM:PFM:REP 6->77|PF02912|4.9e-27|45.8|72/73|Phe_tRNA-synt_N| GO:PFM:NREP 11 GO:PFM GO:0000166|"GO:nucleotide binding"|PF02912|IPR004188| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF02912|IPR004188| GO:PFM GO:0005524|"GO:ATP binding"|PF02912|IPR004188| GO:PFM GO:0005737|"GO:cytoplasm"|PF02912|IPR004188| GO:PFM GO:0006412|"GO:translation"|PF02912|IPR004188| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF02912|IPR004188| GO:PFM GO:0000049|"GO:tRNA binding"|PF01409|IPR002319| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF01409|IPR002319| GO:PFM GO:0005524|"GO:ATP binding"|PF01409|IPR002319| GO:PFM GO:0005737|"GO:cytoplasm"|PF01409|IPR002319| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF01409|IPR002319| RP:SCP:NREP 2 RP:SCP:REP 16->37|1eiyA1|6e-08|31.8|22/79|a.2.7.2| RP:SCP:REP 76->332|1n9eA1|3e-32|9.2|229/460|b.30.2.1| HM:SCP:REP 1->88|1eiyA1|8.4e-21|46.8|79/79|a.2.7.2|1/1|tRNA-binding arm| HM:SCP:REP 82->337|1pysA_|1.7e-75|40.7|246/266|d.104.1.1|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 1117 OP:NHOMOORG 1066 OP:PATTERN --1-1-11111111111-1111-1--------1111111111111111111-11-------111--11 1111111111111111111-11111111111111111111111111111111211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111----------111111-11111111111111111111111111111111 ----222-211-111221-1------1--1111-------------111-2221221-----121211112211212-22211111-1---12---1111112212-2113--11111121-1121121271-11--11111111--1--1--11--21---121--1-14--112----211--1---11-331-11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 333 STR:RPRED 95.4 SQ:SECSTR ###############HHHHHHHHHHHHHHHHHcccccTTcTTTHHHHTTHHHHTHHHHHHHHHHHTTHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHTTTcEEcccccEEETTTTTTTTTcccccTTGGGccccccccccccccEEEccccTHHHHHHHHHccccEEEEEEEEEEccccccccccEEEEEEEEEEETTccHHHHHHHHHHHHHHHHcTTEccEEEEEcccTTEEEEEEEEEEcGGGccEEcEEEEEEcHHHHHHHHHHHHHTcTccccccccEEEEEEEEHHHHHHHTTTcccTHHHHTTcHHHHGGGEEcGGGEEEEEEEEc# PSIPRED cHHHHccccHHHHHHHHHHHHcccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHccccccccccccccEEEEccccccccEEEEEcccHHHHHHHHHccccEEEEEEEEEEccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEEEccccccccEEEEEEEEEcccccccccccccEEEEEccccccHHHHHHccccccccEEEEEEccHHHHHHHHccccHHHHHHcccHHHHHHccccccccccccccccc //