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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : pheT
DDBJ      :pheT         phenylalanyl-tRNA synthetase beta chain
Swiss-Prot:SYFB_AGRT5   RecName: Full=Phenylalanyl-tRNA synthetase beta chain;         EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain;         Short=PheRS;

Homologs  Archaea  7/68 : Bacteria  893/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.153.1b.40.4d.104.1d.58.13
:807 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->794 2rhsD PDBj e-109 33.0 %
:RPS:PDB   1->793 1b70B PDBj 0.0 33.7 %
:RPS:SCOP  35->199 1e7zA  b.40.4.4 * 1e-38 24.8 %
:RPS:SCOP  198->403 1b70B6  b.153.1.1 * 8e-44 40.9 %
:RPS:SCOP  402->473 1b70B2  a.6.1.1 * 3e-20 44.4 %
:RPS:SCOP  505->699 1b70B5  d.104.1.1 * 5e-38 26.6 %
:RPS:SCOP  711->793 1b70B4  d.58.13.1 * 2e-23 26.5 %
:HMM:SCOP  32->200 1ntgA_ b.40.4.4 * 8.9e-48 46.0 %
:HMM:SCOP  196->400 1pysB6 b.153.1.1 * 1.4e-74 48.8 %
:HMM:SCOP  401->475 1pysB2 a.6.1.1 * 7e-19 49.3 %
:HMM:SCOP  466->699 1pysB5 d.104.1.1 * 2.4e-44 31.1 %
:HMM:SCOP  707->806 1pysB4 d.58.13.1 * 1.9e-26 39.0 %
:RPS:PFM   45->145 PF01588 * tRNA_bind 2e-25 57.1 %
:RPS:PFM   216->383 PF03483 * B3_4 3e-51 51.8 %
:RPS:PFM   402->469 PF03484 * B5 1e-13 50.0 %
:RPS:PFM   713->806 PF03147 * FDX-ACB 2e-16 41.5 %
:HMM:PFM   215->386 PF03483 * B3_4 4e-69 50.0 172/174  
:HMM:PFM   44->145 PF01588 * tRNA_bind 6.9e-27 41.5 94/95  
:HMM:PFM   713->806 PF03147 * FDX-ACB 8.6e-25 44.7 94/94  
:HMM:PFM   402->469 PF03484 * B5 5.1e-20 44.1 68/70  
:BLT:SWISS 1->807 SYFB_AGRT5 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86075.1 GT:GENE pheT GT:PRODUCT phenylalanyl-tRNA synthetase beta chain GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 255544..257967 GB:FROM 255544 GB:TO 257967 GB:DIRECTION + GB:GENE pheT GB:PRODUCT phenylalanyl-tRNA synthetase beta chain GB:PROTEIN_ID AAK86075.1 GB:DB_XREF GI:15155152 GB:GENE:GENE pheT LENGTH 807 SQ:AASEQ MKFTLSWLKEHLETDATLDEICERLTAIGLEVEDVDDKAAYKPFVIAKVVSAEKHPEADRLKVLMVDAGDGKPVQIVCGAPNARAGLVGALARPGVYVPGIDVTLAVGKIRGVESHGMMCSEKELNISDDHDGIIDLPEDAPVGTSFATYAGLDDPVIEINLTPNRPDCTSIYGIARDLAASGLGKLKTKAAPSFKVEGATPVDVKLELDDAALCPGFSLRIVRGVKNGPSPKWMQQRLMAIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGDLTVRRAKDGETILALDQREYKLGPNNVVIADEKGLESIGGVMGGEHSGCDENTIDVLIESALWDPINIAKTGRSLGIITDARYRFERGVDPEYMVPGLERTTELVLELCGGIAGEAKIVGYKGHQPKVVDFPLSEVKRLTGLEVSSEESLAILKGLGFGVEGTGERVSVTVPSWRPDVDGKADLVEEVMRIHGVDNIKPEPLENFGAVNGRILTTLQIRTRTARRALASRGMLEAVTWSFIPEAQAKLFSGGSPALKLANPIAADMSDMRPSLLPGLLTAAQRNADKGHGDVAIFEVSGTYEGDTPEKQRRVAGGIRRGTASLAGSGRMWSNAAKGGGKPVDVYDAKADALSVLEACGLPMANVQIEAGAPAWYHPGRSGTIKMGPKVVLGYFGEFHPKTLSELDVSGTYCGFEIYLDAMPEPKKKATRTKPALELSPFQAVKRDFAFVVDKSVEAGAIIKAATSADRKLITGVNVFDIFEGASLGENRKSVAIEVQIQPVDKTLTDEDFEALTAKIVGNVEKSTGGVLRA GT:EXON 1|1-807:0| SW:ID SYFB_AGRT5 SW:DE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; EC=6.1.1.20;AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS; SW:GN Name=pheT; OrderedLocusNames=Atu0259; ORFNames=AGR_C_445; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Magnesium; Metal-binding; Nucleotide-binding;Protein biosynthesis; RNA-binding; tRNA-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->807|SYFB_AGRT5|0.0|100.0|807/807| GO:SWS:NREP 9 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0000049|"GO:tRNA binding"|tRNA-binding| SEG 487->504|rilttlqirtrtarrala| BL:PDB:NREP 1 BL:PDB:REP 1->794|2rhsD|e-109|33.0|767/785| RP:PDB:NREP 1 RP:PDB:REP 1->793|1b70B|0.0|33.7|762/775| RP:PFM:NREP 4 RP:PFM:REP 45->145|PF01588|2e-25|57.1|98/100|tRNA_bind| RP:PFM:REP 216->383|PF03483|3e-51|51.8|168/172|B3_4| RP:PFM:REP 402->469|PF03484|1e-13|50.0|68/70|B5| RP:PFM:REP 713->806|PF03147|2e-16|41.5|94/94|FDX-ACB| HM:PFM:NREP 4 HM:PFM:REP 215->386|PF03483|4e-69|50.0|172/174|B3_4| HM:PFM:REP 44->145|PF01588|6.9e-27|41.5|94/95|tRNA_bind| HM:PFM:REP 713->806|PF03147|8.6e-25|44.7|94/94|FDX-ACB| HM:PFM:REP 402->469|PF03484|5.1e-20|44.1|68/70|B5| GO:PFM:NREP 15 GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| GO:PFM GO:0003723|"GO:RNA binding"|PF03483|IPR005146| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03483|IPR005146| GO:PFM GO:0006412|"GO:translation"|PF03483|IPR005146| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03484|IPR005147| GO:PFM GO:0003723|"GO:RNA binding"|PF03484|IPR005147| GO:PFM GO:0005524|"GO:ATP binding"|PF03484|IPR005147| GO:PFM GO:0006412|"GO:translation"|PF03484|IPR005147| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03484|IPR005147| GO:PFM GO:0000049|"GO:tRNA binding"|PF03147|IPR005121| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03147|IPR005121| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03147|IPR005121| GO:PFM GO:0005524|"GO:ATP binding"|PF03147|IPR005121| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03147|IPR005121| GO:PFM GO:0008033|"GO:tRNA processing"|PF03147|IPR005121| RP:SCP:NREP 5 RP:SCP:REP 35->199|1e7zA|1e-38|24.8|153/173|b.40.4.4| RP:SCP:REP 198->403|1b70B6|8e-44|40.9|203/209|b.153.1.1| RP:SCP:REP 402->473|1b70B2|3e-20|44.4|72/75|a.6.1.1| RP:SCP:REP 505->699|1b70B5|5e-38|26.6|177/207|d.104.1.1| RP:SCP:REP 711->793|1b70B4|2e-23|26.5|83/94|d.58.13.1| HM:SCP:REP 32->200|1ntgA_|8.9e-48|46.0|161/0|b.40.4.4|1/1|Nucleic acid-binding proteins| HM:SCP:REP 196->400|1pysB6|1.4e-74|48.8|205/209|b.153.1.1|1/1|PheT/TilS domain| HM:SCP:REP 401->475|1pysB2|7e-19|49.3|75/75|a.6.1.1|1/1|Putative DNA-binding domain| HM:SCP:REP 466->699|1pysB5|2.4e-44|31.1|206/207|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 707->806|1pysB4|1.9e-26|39.0|100/104|d.58.13.1|1/1|Anticodon-binding domain of PheRS| OP:NHOMO 1048 OP:NHOMOORG 911 OP:PATTERN 11-------------1-----------------------------------1---11-----1----- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222222222222222222222222222222221122222222222222222222222222222222222221222222222222222222222222222221222222222222222222222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111-111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------111212-1121-11----212112221111111111111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-1--1--1--1--2-----1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 807 STR:RPRED 100.0 SQ:SECSTR cEEEHHHHHTTcTTcccHHHHHHHHHHHTccEEEEEEcccccTEEEEEEEEEEEETTcTTEEEEEEEcccccEEEEEEccccccTTcEEEEEcTTccccccccccccEEccccEEccEEccHHHHTccccccccccccTTcccTTccGGGTccccEEEEEcccTTcGGGGcHHHHHHHHHHTTccccccccccEccEEEccccccEEEEccTTTccEEEEEEEEccccccccHHHHHHHHHTTcccccHHHHHHHHHHHHccccEEEEEGGGTcTEEEEEEccTTcEEEcTTccEEEccTTcEEEEEEETTEEETTTEEcTTTcccTTccEEEEEEEEccHHHHHHHHHHTTcccHHHHHHHHcccTTcHHHHHHHHHHHHHHHTccEEEcccEEEccccccccEEEcHHHHHHHHTccccHHHHHHHHHHTTcEEEcccccEEEEccTTccccccHHHHHHHHHHHHcGGGcccccccccccGGGccTTHHHHHHHHHHHHHHHHTcEEcccccEEcTTHHHHTTcccccccccccccGGGcEEccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccccccEEEEEEEEEEcccEEcccccEEEEEEEEEcEEccHHHHHHHHHHHHHHHTccccccEEEccccTTccTTcccEEEETTEEEEEEEEEccHHHHHHTTccccEEEEEEEEccccccccTccccHHcccccccccEEEEEcccEEccccHHHHHHHHHHHccTTEEEEEEEEccccTTccTTEEccEEEEEEccccccccHHHHHHHHHHHccccEEETTEEccG DISOP:02AL 806-808| PSIPRED ccccHHHHHHHccccccHHHHHHHHHHccccccccccccccccEEEEEEEEEEEcccccEEEEEEEEcccccEEEEEcccHHHHcccEEEEEEcccEEccccEEEEEEccccccHHHHHHHHHHcccccccccEEEccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEcccccccEEEEEEEEcccccccHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccccccccEEEEEEccccEEEEEccEEcccccccEEEEccccEEEEccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccEEccEEEEcccccccEEEEEEHHHHHHHHcccccHHHHHHHHHHcccEEEEcccEEEEEccccccccccHHHHHHHHHHHHcHHHccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccccHHHHHHHccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEccccccccccEEEEEEccEEEEEEEEEEcHHHHHHccccccEEEEEEcHHHHHHHHcccccccccccccccccccccEEEEEcccccHHHHHHHHHHccccEEEEEEEEEEEcccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcEEEcc //