[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : ptsN
DDBJ      :ptsN         nitrogen regulatory IIA protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  581/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.112.1
:153 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   43->149 1a6jB PDBj 4e-26 49.5 %
:RPS:PDB   3->145 2a0jA PDBj 1e-29 35.7 %
:RPS:SCOP  1->149 1a6jA  d.112.1.1 * 3e-27 36.2 %
:HMM:SCOP  1->147 1hynP_ d.112.1.2 * 3.7e-45 41.5 %
:RPS:PFM   42->145 PF00359 * PTS_EIIA_2 1e-18 49.5 %
:HMM:PFM   6->147 PF00359 * PTS_EIIA_2 1.6e-39 42.9 140/142  
:BLT:SWISS 1->153 PTSN_BRAJA 8e-41 62.1 %
:PROS 51->67|PS00372|PTS_EIIA_TYPE_2_HIS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86147.1 GT:GENE ptsN GT:PRODUCT nitrogen regulatory IIA protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(323822..324283) GB:FROM 323822 GB:TO 324283 GB:DIRECTION - GB:GENE ptsN GB:PRODUCT nitrogen regulatory IIA protein GB:PROTEIN_ID AAK86147.1 GB:DB_XREF GI:15155236 GB:GENE:GENE ptsN LENGTH 153 SQ:AASEQ MALADLLQQDAIIPALKVNSKKQLLQELAAKAARITGVSEREVFDVILQREKLGSTGVGHGIAIPHGKLNSIHQITGVFARLETPVDFEALDDQPVDLVFLLLAPEGAGADHLKALSRIARALRDPELVTKLRATDSDTAIYAFLNQEQATAA GT:EXON 1|1-153:0| BL:SWS:NREP 1 BL:SWS:REP 1->153|PTSN_BRAJA|8e-41|62.1|153/153| PROS 51->67|PS00372|PTS_EIIA_TYPE_2_HIS|PDOC00528| SEG 21->33|kkqllqelaakaa| BL:PDB:NREP 1 BL:PDB:REP 43->149|1a6jB|4e-26|49.5|107/157| RP:PDB:NREP 1 RP:PDB:REP 3->145|2a0jA|1e-29|35.7|143/146| RP:PFM:NREP 1 RP:PFM:REP 42->145|PF00359|1e-18|49.5|103/142|PTS_EIIA_2| HM:PFM:NREP 1 HM:PFM:REP 6->147|PF00359|1.6e-39|42.9|140/142|PTS_EIIA_2| GO:PFM:NREP 3 GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF00359|IPR002178| GO:PFM GO:0006810|"GO:transport"|PF00359|IPR002178| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF00359|IPR002178| RP:SCP:NREP 1 RP:SCP:REP 1->149|1a6jA|3e-27|36.2|149/150|d.112.1.1| HM:SCP:REP 1->147|1hynP_|3.7e-45|41.5|147/293|d.112.1.2|1/1|Phoshotransferase/anion transport protein| OP:NHOMO 803 OP:NHOMOORG 583 OP:PATTERN ------------------------1------------------------------------------- -----2-1-11-2--------1---1------11111111------1-11111111------121---11--------1--1--------------------------1-1111111---1111111111111111-------------------------------------------------------112111111112211112413232121212-1113345351-1222221222222222111111-1351-21232--371121--111121111112121111221212111111111111111111-111111-1111111112-1-4---111---1111------------122111231-1111111111121111122121111111111111-11111212111-211122122211111111111111111-------------111------------------------------1111111111112121111111112111111211111111111111111111111211---11111111111-112-312-111-11111-12111121122121111-------------------------11212111111111111111111111111111---11111-----21111113432333343-4424343424433443444111221111211111111111111142233331-111111111111--11----------1111111211111111111----------1111111211111111111----------122122222212231111111111-------2111111--------221----1---1-1------22-----------1------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 153 STR:RPRED 100.0 SQ:SECSTR HHHHHHccGGGEEEEEccccHHHHHHHHHHHHccTTcccHHHHHHHHHHHHTTccccccccEEccEEEETTccccEEEEEEEEEEEccccTTcccEEEEEEEEEEcccHHHHHHHHHHHHHHHTcHHHHHHHHHcccHHHHHHHHTTccGcGG DISOP:02AL 149-153| PSIPRED ccHHHccccccEEEccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccEEEcccccccccccEEEEEEEcccEEccccccccEEEEEEEEEEccccHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHccccccc //