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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : purU.1
DDBJ      :purU         formyltetrahydrofolate deformylase
Swiss-Prot:             

Homologs  Archaea  25/68 : Bacteria  780/915 : Eukaryota  109/199 : Viruses  1/175   --->[See Alignment]
c.65.1d.58.18
:294 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->36 1zpvC PDBj 5e-04 53.1 %
:BLT:PDB   129->238 1njsA PDBj 3e-18 41.2 %
:RPS:PDB   1->61 3ddnB PDBj 1e-07 14.8 %
:RPS:PDB   81->281 3da8B PDBj 2e-50 22.7 %
:RPS:SCOP  5->75 1zpvA1  d.58.18.7 * 4e-13 30.9 %
:RPS:SCOP  86->259 1c2tA  c.65.1.1 * 3e-52 27.0 %
:HMM:SCOP  1->87 1u8sA1 d.58.18.5 * 2.4e-15 26.2 %
:HMM:SCOP  86->287 1meoA_ c.65.1.1 * 3.4e-64 33.7 %
:RPS:PFM   96->259 PF00551 * Formyl_trans_N 8e-21 38.4 %
:HMM:PFM   86->263 PF00551 * Formyl_trans_N 4.4e-39 32.0 178/181  
:HMM:PFM   4->61 PF01842 * ACT 6.9e-09 26.8 56/66  
:BLT:SWISS 4->280 PURU_CORS1 2e-76 50.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88201.1 GT:GENE purU.1 GT:PRODUCT formyltetrahydrofolate deformylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2433262..2434146 GB:FROM 2433262 GB:TO 2434146 GB:DIRECTION + GB:GENE purU GB:PRODUCT formyltetrahydrofolate deformylase GB:PROTEIN_ID AAK88201.1 GB:DB_XREF GI:15157649 GB:GENE:GENE purU LENGTH 294 SQ:AASEQ MTSYVLTVACKSTRGIVAAISGYLAEKGCNIVDSSQFDDLETGKFFMRVSFISEEGASLQAITEGFQPVSEKFGMASDIYPDGQRMKAMLMVSRFGHCLNDLLYRWKIGALPIDIVGVVSNHFDYQKVVVNHDIPFHHIKVTKENKPKAEAQLMDLIETSGTELVVLARYMQVLSDEMCRKMSGKIINIHHSFLPSFKGANPYKQAYERGVKLIGATAHYVTGDLDEGPIIEQDTVRVTHAQSAEDYVSLGRDVESQVLARAIHAHIHHRTFINGNRTVVFPPSPGSYASERMG GT:EXON 1|1-294:0| BL:SWS:NREP 1 BL:SWS:REP 4->280|PURU_CORS1|2e-76|50.2|277/286| SEG 260->270|araihahihhr| BL:PDB:NREP 2 BL:PDB:REP 5->36|1zpvC|5e-04|53.1|32/84| BL:PDB:REP 129->238|1njsA|3e-18|41.2|102/200| RP:PDB:NREP 2 RP:PDB:REP 1->61|3ddnB|1e-07|14.8|61/525| RP:PDB:REP 81->281|3da8B|2e-50|22.7|198/205| RP:PFM:NREP 1 RP:PFM:REP 96->259|PF00551|8e-21|38.4|164/179|Formyl_trans_N| HM:PFM:NREP 2 HM:PFM:REP 86->263|PF00551|4.4e-39|32.0|178/181|Formyl_trans_N| HM:PFM:REP 4->61|PF01842|6.9e-09|26.8|56/66|ACT| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00551|IPR002376| GO:PFM GO:0016742|"GO:hydroxymethyl-, formyl- and related transferase activity"|PF00551|IPR002376| RP:SCP:NREP 2 RP:SCP:REP 5->75|1zpvA1|4e-13|30.9|68/83|d.58.18.7| RP:SCP:REP 86->259|1c2tA|3e-52|27.0|174/210|c.65.1.1| HM:SCP:REP 1->87|1u8sA1|2.4e-15|26.2|84/86|d.58.18.5|1/1|ACT-like| HM:SCP:REP 86->287|1meoA_|3.4e-64|33.7|202/205|c.65.1.1|1/1|Formyltransferase| OP:NHOMO 1507 OP:NHOMOORG 915 OP:PATTERN ---------------------11-22222122-----------1111111221--------111--22 112-11122221-121122-2111222222212111223311112211211144432211--322432222-------1111121111--11-------1-1-1111111---------------11-112211-2-----111-122222222222222222222222212213211222221122211-12211111111111111122222211122212111111112211111111111111-1111211-11111-1-11111111111111111111111111111111111111111111111111-1111111111111111111111111111111111--111111111111111111111-112322211111112221222223222222222222-21111111211244423453345432221213222211122222222222212221121111111---------------1111-223212232233333343333333433332333323321222442222222222222211122111111111122221---2111123221111111111111112111121222222211111111112221122222225122322222222222222122221--2212------22222222222222222-22222222222222222222222222222222222222222222222222211212222222222--21111111111-2233---222-22222222222222312222333333355443324441----1---322232222222222222222222211211111111111------------------------------------1-11121112121 ------1-------1111111111111-------------------1111111111111111------------------------------1---------1----12-21212-21-11111111214B1-11311111111-11-111-12-3111113121--11132111-21-7112113132141212---3 -----------------------1------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 96.6 SQ:SECSTR cccEEEEEEEEccTTHHHHHHHHHHHTTccEEEEEEEEcccccEEEEEEEEcccccHHHHHHHHHHHTc#######cEEEcccccEEEEEEEccccHHHHHHHHHHccTTccEEEEEEEEccccHHHHHHHTTccEEEccGGGccHHHHHHHHHHHHHTTcccEEEEEEccccccHHHHHHHTTcEEEEEcccTTccccTTHHHHHHHHTccEEEEEEEEcccccccccEEEEEEEEccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEETTEEEEccccTTccccc### DISOP:02AL 288-294| PSIPRED ccEEEEEEEccccccHHHHHHHHHHHccccEEEccccccccccEEEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccEEEEEEEcccccHHHHHHHHHcccccEEEEEEEccccHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHccccEEEEccccccccccccHHHHHHHccccEEEEEEEEEEcccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccEEEEccccccccHHHccc //