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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : rbfA
DDBJ      :rbfA         ribosome-binding factor A
Swiss-Prot:RBFA_AGRT5   RecName: Full=Ribosome-binding factor A;

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.52.7
:138 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   2->128 2e7gA PDBj 2e-27 20.8 %
:RPS:SCOP  9->119 2e7gA1  d.52.7.1 * 2e-27 22.0 %
:HMM:SCOP  6->113 1kkgA_ d.52.7.1 * 3.2e-26 40.0 %
:RPS:PFM   12->118 PF02033 * RBFA 2e-13 42.7 %
:HMM:PFM   12->118 PF02033 * RBFA 4.8e-30 39.8 103/104  
:BLT:SWISS 1->138 RBFA_AGRT5 3e-75 100.0 %
:PROS 83->105|PS01319|RBFA

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK85906.1 GT:GENE rbfA GT:PRODUCT ribosome-binding factor A GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(88258..88674) GB:FROM 88258 GB:TO 88674 GB:DIRECTION - GB:GENE rbfA GB:PRODUCT ribosome-binding factor A GB:PROTEIN_ID AAK85906.1 GB:DB_XREF GI:15154953 GB:GENE:GENE rbfA LENGTH 138 SQ:AASEQ MAKATSSAPSQRMLRVGEQVRAALTQILQRGEVRDDLIEGTVISISEVRMSPDLKIATAYVTPLGVADHTDIISALNRHAKFMRGRLGPQLRQMKYMPELRFRDDTSFDNYQKIDALLRSPEVQRDLGPSNEKDDEQN GT:EXON 1|1-138:0| SW:ID RBFA_AGRT5 SW:DE RecName: Full=Ribosome-binding factor A; SW:GN Name=rbfA; OrderedLocusNames=Atu0086; ORFNames=AGR_C_129; SW:KW Complete proteome; Cytoplasm; rRNA processing. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->138|RBFA_AGRT5|3e-75|100.0|138/138| GO:SWS:NREP 2 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006364|"GO:rRNA processing"|rRNA processing| PROS 83->105|PS01319|RBFA|PDOC01023| RP:PDB:NREP 1 RP:PDB:REP 2->128|2e7gA|2e-27|20.8|125/129| RP:PFM:NREP 1 RP:PFM:REP 12->118|PF02033|2e-13|42.7|103/104|RBFA| HM:PFM:NREP 1 HM:PFM:REP 12->118|PF02033|4.8e-30|39.8|103/104|RBFA| GO:PFM:NREP 1 GO:PFM GO:0006364|"GO:rRNA processing"|PF02033|IPR000238| RP:SCP:NREP 1 RP:SCP:REP 9->119|2e7gA1|2e-27|22.0|109/116|d.52.7.1| HM:SCP:REP 6->113|1kkgA_|3.2e-26|40.0|105/0|d.52.7.1|1/1|Ribosome-binding factor A, RbfA| OP:NHOMO 125 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------1111---------------1----------------------------1---1--------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------1----111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111------------1111111111111----111111--------------------------------------------------------------------------------------1-----------------------------------------------1----------------------------111---------------------------------------------------------------------------------------------------------1-1------------------------------------------------------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 125 STR:RPRED 90.6 SQ:SECSTR #ccccccHHHHHHHHHHHHHHHHHHHHTTc#TTTcHHHHHHTccEEEEEEcTTcccEEEEEcccccHHHHHHHHHHHHTHHHHHHHHHTcTT#ccccccEEEEETTcccccccccccccccccccccc########## DISOP:02AL 1-16, 120-138| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHccccEEEEEEEEcccccEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccEEccEEEEEEccHHHHHHHHHHHHHHHHHHHccccccccccccc //