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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : rbsC.2
DDBJ      :rbsC         ABC transporter, membrane spanning protein (ribose)
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  425/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:340 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   99->331 PF02653 * BPD_transp_2 1e-19 41.6 %
:HMM:PFM   52->330 PF02653 * BPD_transp_2 1.2e-55 35.8 257/267  
:BLT:SWISS 29->321 RBSC_HAEIN 2e-39 34.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88531.2 GT:GENE rbsC.2 GT:PRODUCT ABC transporter, membrane spanning protein (ribose) GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2821126..2822148) GB:FROM 2821126 GB:TO 2822148 GB:DIRECTION - GB:GENE rbsC GB:PRODUCT ABC transporter, membrane spanning protein (ribose) GB:PROTEIN_ID AAK88531.2 GB:DB_XREF GI:159140646 GB:GENE:GENE rbsC LENGTH 340 SQ:AASEQ MANIAEPKKGFAVSDRQKDIIQKFAALGSLFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSVGSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLGMMLIARGVALQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAFTQQIIIGLVILVTVWIDQLRNRR GT:EXON 1|1-340:0| BL:SWS:NREP 1 BL:SWS:REP 29->321|RBSC_HAEIN|2e-39|34.6|280/323| TM:NTM 9 TM:REGION 19->41| TM:REGION 52->74| TM:REGION 78->100| TM:REGION 104->126| TM:REGION 131->153| TM:REGION 190->212| TM:REGION 240->262| TM:REGION 277->299| TM:REGION 314->335| SEG 78->95|lsvgsvlalagvvaalav| RP:PFM:NREP 1 RP:PFM:REP 99->331|PF02653|1e-19|41.6|219/271|BPD_transp_2| HM:PFM:NREP 1 HM:PFM:REP 52->330|PF02653|1.2e-55|35.8|257/267|BPD_transp_2| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF02653|IPR001851| GO:PFM GO:0006810|"GO:transport"|PF02653|IPR001851| GO:PFM GO:0016020|"GO:membrane"|PF02653|IPR001851| OP:NHOMO 2388 OP:NHOMOORG 433 OP:PATTERN -------11-1-----1-------1------------------------------------------- -132A11122211--------111-B------2111-29472-2422-3442647--1111181435A681-----331---8------------------------2-2--------------------------53333---42-------------------111-21------------35---55-5313333343313533252322214331751122------27------------------11-1--22-----11---1------1-1111-1-1------------------------------111---124--7-----1-11142--12228321-1-11-11-2-331-44133321--4-11------3-DDD----1---7788788788O------1-26Y--ZPPFQJXUXQXX11---9B7A5AA763--------GA9----5------------------------------------11-1DAABAA86665BBNH88984998H-31---7747-3--4214BT-------11---------------1-2----11----1-1-11--------7-----------------------------357-------4----2--52222--2-2---------------96793C68AA8896A89-A87A86A9A9A99888888HFI791114344444444444434C84577652-CKKKLKKIJKLL-----------1--122A333634-234348C7----------3111111248-2121-677----------11172222212122-----------------1--------------111-------------2221---1----2241-28272-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,4-17,340-341| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccccccccHHHccccHHHcccHHHHHHHHHHHHHHHHHHcccccHHEEEEEcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcc //