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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : rbsK
DDBJ      :rbsK         ribokinase
Swiss-Prot:             

Homologs  Archaea  15/68 : Bacteria  468/915 : Eukaryota  167/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:299 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->299 1rkdA PDBj 1e-41 33.2 %
:RPS:PDB   2->299 2c49A PDBj 7e-42 17.4 %
:RPS:SCOP  2->299 2fv7A1  c.72.1.1 * 2e-55 30.9 %
:HMM:SCOP  2->300 2fv7A1 c.72.1.1 * 4.4e-70 36.5 %
:RPS:PFM   4->286 PF00294 * PfkB 1e-19 37.2 %
:HMM:PFM   2->290 PF00294 * PfkB 4.1e-58 32.3 279/300  
:BLT:SWISS 2->299 RBSK_ECOLI 3e-41 33.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86181.1 GT:GENE rbsK GT:PRODUCT ribokinase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(358549..359448) GB:FROM 358549 GB:TO 359448 GB:DIRECTION - GB:GENE rbsK GB:PRODUCT ribokinase GB:PROTEIN_ID AAK86181.1 GB:DB_XREF GI:15155276 GB:GENE:GENE rbsK LENGTH 299 SQ:AASEQ MITVFGSINMDLVATAKRLPKPGETVTGDTFSTAAGGKGANQALAARRAGVTVKMAGATGDDTFAAPALTLLRDAGTDLSLVKTAPGPTGTAVILIGEGGENMISVIPAANGEVSAFDATKVVGEMDAGDILMLQFEIPAAAIEAALTAAKAKRITTVINTAPLTADGPRLAGLADIVIANETEFELLIGKNGLSSGERESELKALHDRTGQTLIVTLGADGVIAMRNGKVFSASGLKIEPVDTVGAGDTFCGYLAASLDQGMDFEKALKRAAVAGSLACTRAGAQPSIPQAAEVDAAL GT:EXON 1|1-299:0| BL:SWS:NREP 1 BL:SWS:REP 2->299|RBSK_ECOLI|3e-41|33.2|298/309| SEG 140->152|aaaieaaltaaka| BL:PDB:NREP 1 BL:PDB:REP 2->299|1rkdA|1e-41|33.2|298/306| RP:PDB:NREP 1 RP:PDB:REP 2->299|2c49A|7e-42|17.4|288/299| RP:PFM:NREP 1 RP:PFM:REP 4->286|PF00294|1e-19|37.2|277/295|PfkB| HM:PFM:NREP 1 HM:PFM:REP 2->290|PF00294|4.1e-58|32.3|279/300|PfkB| RP:SCP:NREP 1 RP:SCP:REP 2->299|2fv7A1|2e-55|30.9|298/308|c.72.1.1| HM:SCP:REP 2->300|2fv7A1|4.4e-70|36.5|299/0|c.72.1.1|1/1|Ribokinase-like| OP:NHOMO 949 OP:NHOMOORG 650 OP:PATTERN ------12111111111--111------1--------------------------------------- 1-1--11122211112211-11---111111-1111111122--131----1212--1--1122-221131111121211--2-------2--1-----1---11--1-1--------------------------12211----1-11----11-----------11111------------212-----2111111111111111113111111111111111------13111111111111111111112211111311123221111212222111111-1------------------------------------1----2111111121111--111112-11---1----1--21--221-1-1--1111--------212--1-----1111111-112---2--1--14--233422244311--11-2323132421--------11111-11----------------------------------------2333322----2224222212323------111--1----1-12----1--11--------------1--1-----1------------------11----------------------------1231----2-1-111111111111121121-------------22121211114124312-121123213413111111232311114534455555564544612211111--322222211222-------------1-111222113-11112221------1-----11111222-1111-1131----1----1111222221111211-1111111-------1----------------1----1---------------------111--31112-- -----11-2111111111112222122--111111111-1111---1111222222121-1111111111111111111111111111----1111111-1111-1-1612111111111111111-11261-112---12111-111-11111-111111-1113131111121-111-21-2122311121132121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 299 STR:RPRED 100.0 SQ:SECSTR cEEEEcccEEEEEEEcccccccccccccccccEEEEcHHHHHHHHHHHTTcEEEEEcEEcTTTTTcHHHHHHHHTTcccTTcEEccccccEEEEEEcTTccEEEEEEcGGGGGGGGGGcccccccEEEEEEEcccHHHHHHHHHHHcTTcEEEEEcGGGGGGccHHHHHHHHTTccEEEEcHHHHHHHHHccccccHHHHTccHHHHHTTccEEEEEcGGGcEEEEcccEEEEcccccccccccTTHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTcccccTTcccHHHHHHHH DISOP:02AL 299-300| PSIPRED EEEEEccccEEEEEEcccccccccEEEcccEEEEcccHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHccccccEEEEcccccEEEEEEEcccccEEEEEcccccccccHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHccccEEEEcHHHHHHHcccccccHHHHHHHHHHHHHccccEEEEEEccccEEEEEccEEEEEcccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHc //