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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : rrpX
DDBJ      :rrpX         two component response regulator
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  608/915 : Eukaryota  24/199 : Viruses  1/175   --->[See Alignment]
c.23.1
:249 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   116->218 2ayzA PDBj 1e-12 36.0 %
:RPS:PDB   12->101 2ch4A PDBj 2e-04 12.2 %
:RPS:PDB   106->146 2byhA PDBj 4e-04 2.4 %
:RPS:PDB   118->242 2c15A PDBj 4e-18 11.8 %
:RPS:SCOP  111->235 1a0oA  c.23.1.1 * 3e-21 29.0 %
:HMM:SCOP  1->109 1s8nA_ c.23.1.1 * 2e-06 26.0 %
:HMM:SCOP  111->233 1s8nA_ c.23.1.1 * 4e-30 35.3 %
:RPS:PFM   116->223 PF00072 * Response_reg 1e-16 42.3 %
:HMM:PFM   14->93 PF00072 * Response_reg 6.3e-05 21.8 78/112  
:HMM:PFM   116->227 PF00072 * Response_reg 4.4e-25 39.4 109/112  
:BLT:SWISS 22->86 THIG_SOLUE 3e-04 35.9 %
:BLT:SWISS 116->219 CHEY_HELPY 2e-14 34.6 %
:PROS 185->195|PS00639|THIOL_PROTEASE_HIS

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87409.2 GT:GENE rrpX GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1616742..1617491) GB:FROM 1616742 GB:TO 1617491 GB:DIRECTION - GB:GENE rrpX GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK87409.2 GB:DB_XREF GI:159140130 GB:GENE:GENE rrpX LENGTH 249 SQ:AASEQ MFTQMVSMRLNEMLGVSVEVCRSFEELQACYEHSPEPVTLAISNINLPGAEKGEALEYLIDLSIPTIVFTSTFHEATRETLIAKDVVDYILKDNIFAVDMLTESVCRFLTNHRHHVLIVDDSPTARALLSSRLKRYNFRVSLADSGAKALEILRANPDIGLVVTDYNMPDIDGFELTRRIRTVRGSHELRIIGVSSSTNRLLSARFLKAGGNDFMLRPFIDEEFYCRVNQNLDTLVQIQLAKAGIRPAA GT:EXON 1|1-249:0| BL:SWS:NREP 2 BL:SWS:REP 22->86|THIG_SOLUE|3e-04|35.9|64/259| BL:SWS:REP 116->219|CHEY_HELPY|2e-14|34.6|104/124| PROS 185->195|PS00639|THIOL_PROTEASE_HIS|PDOC00126| BL:PDB:NREP 1 BL:PDB:REP 116->218|2ayzA|1e-12|36.0|100/133| RP:PDB:NREP 3 RP:PDB:REP 12->101|2ch4A|2e-04|12.2|88/320| RP:PDB:REP 106->146|2byhA|4e-04|2.4|41/215| RP:PDB:REP 118->242|2c15A|4e-18|11.8|119/332| RP:PFM:NREP 1 RP:PFM:REP 116->223|PF00072|1e-16|42.3|104/111|Response_reg| HM:PFM:NREP 2 HM:PFM:REP 14->93|PF00072|6.3e-05|21.8|78/112|Response_reg| HM:PFM:REP 116->227|PF00072|4.4e-25|39.4|109/112|Response_reg| GO:PFM:NREP 3 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 1 RP:SCP:REP 111->235|1a0oA|3e-21|29.0|124/128|c.23.1.1| HM:SCP:REP 1->109|1s8nA_|2e-06|26.0|104/190|c.23.1.1|1/2|CheY-like| HM:SCP:REP 111->233|1s8nA_|4e-30|35.3|119/190|c.23.1.1|2/2|CheY-like| OP:NHOMO 2004 OP:NHOMOORG 637 OP:PATTERN --------------------------------------------1--3-3--1--------------- 28812---------1------4----------2324-2113211331-1111332111--211-2-112-11111111111---11--2231-2-------1-11516-8---------------11-112-1-34A99B91114-J7DH44488121111126593EGJ811-----11-1-1311211-1124444434424453345422124441--21211-----77---------------1----11222221111222211212122-------------------------------------1---------23227-------112-311-111433--311224551-42---22-2---4511--311111327985336667644244443442-23622624141-7664687BB86511115221657524455555555-1-32834--------11---1111-1--1--1-----1-111111112442521----3356------3353532-13327-322144411-2343124--------11235K1FC6-2574BE55617668856355364CD653221-33333211111111127322--B52436313232232324222232322369---1135------22111112222222222-2222222222222222222233--111222222222221212212212222--212233212332--1211111----14A28---------------22222121114565655886746663545---------2212444444434453333333222------B16622221-----------------------------------12--112111-7- ----23--------4------------------------------------------------------------------------1-------1-----1---1----------------------------------------------------2--------------2--111-11111798A-A4--2---- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 235 STR:RPRED 94.4 SQ:SECSTR ###########EEccccEEEEEEHHHHTTccccccccccHHccccccccHHHHHHTcHHHTTEEccEEEEcTTTGGGHHHHHHHHHHHHHHHHHHHHHHHTTcccccccccTTcEEEHHHHHHHTcHHHHTTcccTTTcccTTccHHHHHHHHHcccHHHTTccEEEEccGGGHHHHHHHTTcHHHHcccEEEEEcHHHHHHHHHHHHTTcccTTHHHHHHHHHHHHTccEEEETTHHHHHHcccE### DISOP:02AL 234-250| PSIPRED cHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHccccEEEEEEcccHHHHHHHHHcccccHHHccccccHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHHHHccccccccc //