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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : slt
DDBJ      :slt          soluble lytic transglycosylase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  374/915 : Eukaryota  1/199 : Viruses  1/175   --->[See Alignment]
d.2.1
:179 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   60->161 1qsaA PDBj 5e-14 40.2 %
:RPS:PDB   60->173 132lA PDBj 8e-20 10.6 %
:RPS:SCOP  60->159 1qsaA2  d.2.1.6 * 1e-19 38.0 %
:HMM:SCOP  58->180 1qsaA2 d.2.1.6 * 2.7e-30 44.7 %
:RPS:PFM   66->161 PF01464 * SLT 6e-16 47.9 %
:HMM:PFM   63->161 PF01464 * SLT 5.9e-24 39.4 99/121  
:BLT:SWISS 68->158 YOMI_BACSU 5e-15 46.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87860.2 GT:GENE slt GT:PRODUCT soluble lytic transglycosylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2076523..2077062) GB:FROM 2076523 GB:TO 2077062 GB:DIRECTION - GB:GENE slt GB:PRODUCT soluble lytic transglycosylase GB:PROTEIN_ID AAK87860.2 GB:DB_XREF GI:159140326 GB:GENE:GENE slt LENGTH 179 SQ:AASEQ MNRFVVAVVAGVVALASQAGISFAKDEDVKTKTVTLETFVRKPGYPIPEKSLPASLKNGYSDLIVKYAKRYGVPTNLAHAVVSVESKFNPKARGSAGEVGLMQIKPATARMMGFRGATKALYDPETNIRWGMQYLATAHQLGGGEVCSTILRYNAGHGATRMNPVSKRYCGKVQALLAS GT:EXON 1|1-179:0| BL:SWS:NREP 1 BL:SWS:REP 68->158|YOMI_BACSU|5e-15|46.0|87/2285| SEG 5->16|vvavvagvvala| BL:PDB:NREP 1 BL:PDB:REP 60->161|1qsaA|5e-14|40.2|102/618| RP:PDB:NREP 1 RP:PDB:REP 60->173|132lA|8e-20|10.6|113/124| RP:PFM:NREP 1 RP:PFM:REP 66->161|PF01464|6e-16|47.9|96/113|SLT| HM:PFM:NREP 1 HM:PFM:REP 63->161|PF01464|5.9e-24|39.4|99/121|SLT| RP:SCP:NREP 1 RP:SCP:REP 60->159|1qsaA2|1e-19|38.0|100/168|d.2.1.6| HM:SCP:REP 58->180|1qsaA2|2.7e-30|44.7|123/168|d.2.1.6|1/1|Lysozyme-like| OP:NHOMO 484 OP:NHOMOORG 376 OP:PATTERN -------------------------------------------------------------------- -1-1------------------------------------------------------------1------------------1-------------------------------------------------------------1------1----1--------1------------------------11111111111111111111111211111111--11111111------------------------------------------------------------------------------------------2111-1111111-11-1221-------13--21112111--222211------1--1-11112222111112-1122222222212-2211242232--222222222232-----1121211-11---------------1------------------------------3---------2222222111122-111111122-1121--112--211111-1-1-3-1--11-1-----111--21--12-11---22213233331231111222-------------1--------1---11-1--1-1--111-1111-111111111111--2--11---11111---111111111111-111111111111111111112111--2111111111111111111112221-1111111111111--------------2---111---11111-11-111111111111----2-2--1112-111---------1--------------11111111111111--3122------------1---------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 141 STR:RPRED 78.8 SQ:SECSTR ######################################TTTccccEEHHHHHHHHHHHHHHHHHHTTcTTcTTccHHHHHHHHHHHTTcTTcEEccEEETTTTEETTTTccccccTTccTTcccGGGGGccccHHHHHHHTHHHHTccGGGGcHHHHHHTTccGGGGGTTcccGGGccc DISOP:02AL 1-1,179-180| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcccccHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccEEEEEEcHHHHHHHcccccHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHcc //