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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : tldD
DDBJ      :tldD         TldD
Swiss-Prot:             

Homologs  Archaea  57/68 : Bacteria  522/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
d.283.1
:471 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   264->436 1vl4A PDBj 3e-18 30.7 %
:RPS:PDB   123->329 2ae5B PDBj 5e-28 15.9 %
:RPS:SCOP  13->466 1vl4A  d.283.1.1 * e-107 19.1 %
:HMM:SCOP  7->469 1vpbA_ d.283.1.1 * 6e-132 40.8 %
:RPS:PFM   31->321 PF01523 * PmbA_TldD 1e-42 40.6 %
:HMM:PFM   28->321 PF01523 * PmbA_TldD 1.1e-66 35.1 288/293  
:BLT:SWISS 28->469 TLDD_HAEIN e-131 54.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK86574.2 GT:GENE tldD GT:PRODUCT TldD GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(760182..761597) GB:FROM 760182 GB:TO 761597 GB:DIRECTION - GB:GENE tldD GB:PRODUCT TldD GB:PROTEIN_ID AAK86574.2 GB:DB_XREF GI:159139768 GB:GENE:GENE tldD LENGTH 471 SQ:AASEQ MTDDLVKLFDCDETQLRKLVGEALAGADDGELFIEHAQAESLTFDNGRLKGGSFNTDQGFGLRAVAGETVGYAHAGELSEGALKRASDAVGAVTRGYSGSYAAAPQRTNKKLYGDENPIGSPSFEEKVKLLTDIDAYLRDRDDKVRQVTATISASWQVVDILRADGHRVSDIRPMTRINISVVAGEGDRQESGSYGIGGRVGFGDFITTENWQRGADEALRQALVNLTAIDAPAGTMDVVLGSGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGEMVAAPGVTVVDDGTIDSRRGSLTIDDEGTPSAYNVLIENGRLVGYMQDRQNARLMGAKATGNGRRQGYAYVPMPRMTNTYMLSGDKTPEEIISSVKKGIYAVSFGGGQVDITSGKFVFGCTEAYLIENGKIGAPVKGAMLIGNGPDAMKRVSMIGNDSKLDTGIGNCGKAGQWVPVGVGQPHLRMDQITVGGTKA GT:EXON 1|1-471:0| BL:SWS:NREP 1 BL:SWS:REP 28->469|TLDD_HAEIN|e-131|54.4|441/482| BL:PDB:NREP 1 BL:PDB:REP 264->436|1vl4A|3e-18|30.7|166/428| RP:PDB:NREP 1 RP:PDB:REP 123->329|2ae5B|5e-28|15.9|195/522| RP:PFM:NREP 1 RP:PFM:REP 31->321|PF01523|1e-42|40.6|286/293|PmbA_TldD| HM:PFM:NREP 1 HM:PFM:REP 28->321|PF01523|1.1e-66|35.1|288/293|PmbA_TldD| RP:SCP:NREP 1 RP:SCP:REP 13->466|1vl4A|e-107|19.1|423/428|d.283.1.1| HM:SCP:REP 7->469|1vpbA_|6e-132|40.8|431/0|d.283.1.1|1/1|Putative modulator of DNA gyrase, PmbA/TldD| OP:NHOMO 1008 OP:NHOMOORG 582 OP:PATTERN 1131422222222222411111-2--------222221222222221222222266666651212--2 23312---------11111-11--11111111111111111111----------------321----1111------------22-22--2--2---------11--2---------------------------------222--24434432233111111432544311111111111112--2-66--------------------1----------2-------------------------------------------------------------------------------------------------------222-1-----2-2-2---2222---1---22112222-522--1-2--32-233222222--2222222222122222222222---------221-222222222222--222222222222222222222222221222222222212---------------22211-2222111111111213222211212222112122112222212222222222211111223211111112222223--------------2221222--223242---------------------------112222--122111111111111111112111--1-11311-11111111111111111111-1111111111111111111111221111111111111111111111111111-111111111111221122222222221-2-11111111-112111----------3-33232232222223332----------111211111221223333333111111111-2222222--------3-22222---------------------24222232221-- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 307 STR:RPRED 65.2 SQ:SECSTR ##########################################################################################################################cHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHc#########cccccTTcccHHHHHHHHHHHccTTccccTTEEEcccTTcTTTccEEEHHHHHHHHHHHHHHHccTTccHHHHcEEEETTEEEEcccHccccGGGTccccEEEccccTTccccEEEcEEEEEEcccccEEEEEETTcccccTcccHHHHHTTccEEccccHHHHHEEEcccccccccEEEEcccEEEEEcEEEEcTTccccTHHHHHTTccEEEEEEcHHccTTTcEEEEEEEEEEEEETTEEEEEEEEEEEEEEHHHHHHTEEEEccccEETc################################# DISOP:02AL 1-1,470-472| PSIPRED ccHHHHHHccccHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEccEEEccEEEEEEEEEEEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEccEEEEEEEEcccEEEEEEEEEEEEEEEEEEEEccEEEEEEEcccccccHHHHcccccHHHHHHHHHHHHHHHcccccccccEEEEEEcHHHHHHHHHHHHHccccHHHHHccccHHHHccccccccccEEEEEccccccccEEccccccccccccEEEEEccEEEcccccHHHHHHHccccccccccccccccccccccEEEEEcccccHHHHHHHcccEEEEEccccccEEEEcEEEEEEcccEEEEEccEEEEEEEccEEEEEHHHHHHHHHHccccEEEEcccccccccccEEEEcccccEEEEEEEEEEcccc //