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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : tolB.1
DDBJ      :tolB         tolB protein
Swiss-Prot:Y1656_AGRT5  RecName: Full=Uncharacterized protein Atu1656;

Homologs  Archaea  7/68 : Bacteria  433/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
b.68.7b.70.3
:276 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->275 2ojhA PDBj e-155 99.6 %
:RPS:PDB   5->262 1c5kA PDBj 3e-39 24.4 %
:RPS:SCOP  28->264 1xfdA1  b.70.3.1 * 5e-11 15.1 %
:HMM:SCOP  4->262 1k32A2 b.68.7.1 * 1.5e-35 29.8 %
:RPS:PFM   73->270 PF10282 * Muc_lac_enz 1e-05 26.8 %
:HMM:PFM   26->37 PF07676 * PD40 0.0004 58.3 12/39  
:HMM:PFM   111->137 PF07676 * PD40 4e-07 37.0 27/39  
:HMM:PFM   147->182 PF07676 * PD40 4.9e-14 41.7 36/39  
:HMM:PFM   232->271 PF00930 * DPPIV_N 0.0002 35.1 37/353  
:BLT:SWISS 1->276 Y1656_AGRT5 e-170 100.0 %
:REPEAT 3|136->165|174->217|226->272

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87430.2 GT:GENE tolB.1 GT:PRODUCT tolB protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1640744..1641574) GB:FROM 1640744 GB:TO 1641574 GB:DIRECTION - GB:GENE tolB GB:PRODUCT tolB protein GB:PROTEIN_ID AAK87430.2 GB:DB_XREF GI:159140140 GB:GENE:GENE tolB LENGTH 276 SQ:AASEQ MRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPVE GT:EXON 1|1-276:0| SW:ID Y1656_AGRT5 SW:DE RecName: Full=Uncharacterized protein Atu1656; SW:GN OrderedLocusNames=Atu1656; ORFNames=AGR_C_3050; SW:KW 3D-structure; Complete proteome. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->276|Y1656_AGRT5|e-170|100.0|276/293| NREPEAT 1 REPEAT 3|136->165|174->217|226->272| BL:PDB:NREP 1 BL:PDB:REP 2->275|2ojhA|e-155|99.6|267/269| RP:PDB:NREP 1 RP:PDB:REP 5->262|1c5kA|3e-39|24.4|242/397| RP:PFM:NREP 1 RP:PFM:REP 73->270|PF10282|1e-05|26.8|190/311|Muc_lac_enz| HM:PFM:NREP 4 HM:PFM:REP 26->37|PF07676|0.0004|58.3|12/39|PD40| HM:PFM:REP 111->137|PF07676|4e-07|37.0|27/39|PD40| HM:PFM:REP 147->182|PF07676|4.9e-14|41.7|36/39|PD40| HM:PFM:REP 232->271|PF00930|0.0002|35.1|37/353|DPPIV_N| RP:SCP:NREP 1 RP:SCP:REP 28->264|1xfdA1|5e-11|15.1|212/465|b.70.3.1| HM:SCP:REP 4->262|1k32A2|1.5e-35|29.8|238/281|b.68.7.1|1/1|Tricorn protease N-terminal domain| OP:NHOMO 528 OP:NHOMOORG 448 OP:PATTERN ------------------------1-----1---------------1--2122--------------- 25A----------------------------------------1-11--1--111------1---11----------------------11--2-----1----311-21--------------1111111111113--11---411-------------------------------------------1-----------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------4--1223-1------1-1111111111111111111-1111111111112222222222-1111-11111111111111111111111111111--------111111111111111----1223111111111111111111111111111111111111111121111111111111111111-------22111112111----1-----11111111122322111-------------------------1111111-121112222232232212222122--11221------111-111111111111--1111111111111111111111--1111111111111111111111111111-111111111111--1-11111111111111111-111111111111111111111--1111111111111111111-1--1-11---111111--11111111111111111-11-----------------------------------------------------11- -----------------------1-1----------------------------------------------------------------------------------------------------------------------------------------------------1-----------121-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 99.3 SQ:SECSTR #ccGEEEEETTccccEEEEEEcccEEEEEEcTTccEEETTcccEEEEEETTTTcccEEEEEcccccEEEEEEEcTTccEEEEEEccTTcccEEEEEETTTccEEEcccccccEEEEEcTTccEEEEEEcTTcccEEEEEETTccccEEccccccEEEEEEEcTTccEEEEEEEETTEEEEEEEETTTccEEEccccccccEEEEEcTTccEEEEEEEETTEEEEEEETEEEEEEEETTcccccTEEEccccccEEEEEEEccTccEEEEEEEccc# DISOP:02AL 274-277| PSIPRED cccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccEEccEEEcccccEEEEEEccccccEEEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEEcccccEEEcccccccccEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEEccccEEEccccccEEEEEEEcccccEEEEEEccccccEEEEEEEcccccEEEEEEEcccc //