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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : tpiA
DDBJ      :tpiA         triosephosphate isomerase
Swiss-Prot:TPIS_AGRT5   RecName: Full=Triosephosphate isomerase;         Short=TIM;         EC=5.3.1.1;AltName: Full=Triose-phosphate isomerase;

Homologs  Archaea  0/68 : Bacteria  893/915 : Eukaryota  180/199 : Viruses  0/175   --->[See Alignment]
c.1.1
:256 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->250 2btmA PDBj 2e-51 45.8 %
:RPS:PDB   6->256 1b9bB PDBj 3e-75 36.7 %
:RPS:SCOP  6->252 1ag1O  c.1.1.1 * 5e-58 36.4 %
:HMM:SCOP  3->255 1m6jA_ c.1.1.1 * 1.2e-83 49.2 %
:RPS:PFM   7->247 PF00121 * TIM 9e-60 50.2 %
:HMM:PFM   7->247 PF00121 * TIM 9.7e-84 44.5 238/244  
:BLT:SWISS 1->256 TPIS_AGRT5 e-147 100.0 %
:PROS 167->177|PS00171|TIM_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87399.1 GT:GENE tpiA GT:PRODUCT triosephosphate isomerase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1604904..1605674) GB:FROM 1604904 GB:TO 1605674 GB:DIRECTION - GB:GENE tpiA GB:PRODUCT triosephosphate isomerase GB:PROTEIN_ID AAK87399.1 GB:DB_XREF GI:15156709 GB:GENE:GENE tpiA LENGTH 256 SQ:AASEQ MTPNVRPLVAGNWKMNGTRASLDQIKAMAEGVKGALSEKVDALICPPSTLLYVATALCDDSPLLIGAQDCHQNDTGAHTGDISAEMIADCFGTHVIVGHSERRTDHAETDHLVRAKASAAHQVDLIAIVCIGETADERKAGQTLDILKRQLAGSLPDEATAENTVIAYEPVWAIGTGLTPTTQDVREAHAFMRDELVKRFGDAGKTMRILYGGSVKPANALELMGVENVDGALIGGASLKAADFLSIYAAYEQLTA GT:EXON 1|1-256:0| SW:ID TPIS_AGRT5 SW:DE RecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1;AltName: Full=Triose-phosphate isomerase; SW:GN Name=tpiA; OrderedLocusNames=Atu1620; ORFNames=AGR_C_2987; SW:KW Complete proteome; Cytoplasm; Gluconeogenesis; Glycolysis; Isomerase;Pentose shunt. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->256|TPIS_AGRT5|e-147|100.0|256/256| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006094|"GO:gluconeogenesis"|Gluconeogenesis| GO:SWS GO:0006096|"GO:glycolysis"|Glycolysis| GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| GO:SWS GO:0006098|"GO:pentose-phosphate shunt"|Pentose shunt| PROS 167->177|PS00171|TIM_1|PDOC00155| BL:PDB:NREP 1 BL:PDB:REP 6->250|2btmA|2e-51|45.8|240/250| RP:PDB:NREP 1 RP:PDB:REP 6->256|1b9bB|3e-75|36.7|248/255| RP:PFM:NREP 1 RP:PFM:REP 7->247|PF00121|9e-60|50.2|239/242|TIM| HM:PFM:NREP 1 HM:PFM:REP 7->247|PF00121|9.7e-84|44.5|238/244|TIM| GO:PFM:NREP 2 GO:PFM GO:0004807|"GO:triose-phosphate isomerase activity"|PF00121|IPR000652| GO:PFM GO:0008152|"GO:metabolic process"|PF00121|IPR000652| RP:SCP:NREP 1 RP:SCP:REP 6->252|1ag1O|5e-58|36.4|242/249|c.1.1.1| HM:SCP:REP 3->255|1m6jA_|1.2e-83|49.2|252/0|c.1.1.1|1/1|Triosephosphate isomerase (TIM)| OP:NHOMO 1293 OP:NHOMOORG 1073 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111211111111111111111122211221212111111111221121111111111111111111111111111--1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111112222221111111111111111111111111111121111123111111111111111111111111111111111111111111111111111111111111111111111111111111111111112122121111111111111111111111111111111111111122222222222-1111111112113111223222221111111111112111111111111121112111111111111-------------111111111111111111111111111111111111111111211111111111111111111121111111111111111111121111111111111111111111111111111111111111111111111111112221131111111111111111111111111-1111111111111211111111111111-111111111111111111222222111111111111111111111111111111111111111111111111111111111121113121111111121111111111321111111111111111111111111111111111111111111111111111111111111111111111111111111-1-11111111111111111111111111111111 2111111-3111111222222222221211111222222222222211221121222222222111111111111111-111111111-12121111-111121111141121112-1-1-11-11-313A3-313-1-11-111-1-1-11-111-11341111-1312111321113I4322263762224533316 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 254 STR:RPRED 99.2 SQ:SECSTR #ccccccEEEEEccccccHHHHHHHHHHHHHTccccccccEEEEEccGGGHHHHHHHHTTcccEEEEcccccccccccTTcccHHHHHHHTccEEEEccHHHHHHTcccHHHHHHHHHHHHHTTcEEEEEEcccHHHHHTTcHHHHHHHHHHHHHTcHHHHHHcEEEEccGGGccccccccHHHHHHHHHHHHHHHHHHccHHHHHcEEEEcccccTTTTHHHHTcTTccEEEEcGGGTccTHHHHHHHHHHTTc# DISOP:02AL 1-3, 255-256| PSIPRED ccccccEEEEEEEcccccHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHcccEEEEEEcccHHHHHcccHHHHHHHHHHHHcccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHccccccEEEEHHHHccHHHHHHHHHHHHHHcc //