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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : tsf
DDBJ      :tsf          translation elongation factor Ts
Swiss-Prot:EFTS_AGRT5   RecName: Full=Elongation factor Ts;         Short=EF-Ts;

Homologs  Archaea  0/68 : Bacteria  908/915 : Eukaryota  96/199 : Viruses  0/175   --->[See Alignment]
a.5.2d.43.1
:308 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->307 1efuB PDBj 5e-50 43.4 %
:RPS:PDB   6->195 1aipC PDBj 8e-47 35.6 %
:RPS:SCOP  4->55 1xb2B1  a.5.2.2 * 1e-20 30.8 %
:RPS:SCOP  54->148 1xb2B2  d.43.1.1 * 3e-24 42.1 %
:RPS:SCOP  146->288 1aipC2  d.43.1.1 * 1e-30 32.6 %
:HMM:SCOP  4->55 1aipC1 a.5.2.2 * 2.6e-19 71.2 %
:HMM:SCOP  57->289 1tfeA_ d.43.1.1 * 7.4e-51 50.7 %
:RPS:PFM   8->41 PF00627 * UBA 1e-05 60.6 %
:RPS:PFM   57->288 PF00889 * EF_TS 6e-31 46.5 %
:HMM:PFM   57->289 PF00889 * EF_TS 3.8e-75 50.9 220/221  
:HMM:PFM   4->41 PF00627 * UBA 1.1e-15 37.8 37/37  
:BLT:SWISS 1->308 EFTS_AGRT5 e-158 100.0 %
:PROS 12->27|PS01126|EF_TS_1
:PROS 75->85|PS01127|EF_TS_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87167.2 GT:GENE tsf GT:PRODUCT translation elongation factor Ts GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1369132..1370058 GB:FROM 1369132 GB:TO 1370058 GB:DIRECTION + GB:GENE tsf GB:PRODUCT translation elongation factor Ts GB:PROTEIN_ID AAK87167.2 GB:DB_XREF GI:159140025 GB:GENE:GENE tsf LENGTH 308 SQ:AASEQ MTEITAAMVKELREKSGAGMMDCKKALAETNGDMEAAIDWLRAKGIAKADKKSGRTAAEGLIGVATMGHKAVVVELNSETDFVARNDAFQDLIRGIAQVALTTDGTVDAVSAATYPATGKSVADSIKDAIATIGENMTLRRSAALEVPHGVVATYVHNAAGDGIGKLGVLVALKSEGDKAVLNSIGRQVAMHIAATNPLAIRAEEVDAAVAERERNVFIEQARESGKPEAIIEKMVDGRMRKFFEEVALLSQAFVINPDITVGAAIKEVEKEAGASIEVTGMVRLLLGEGVEKEESDFAAEVAAVAKG GT:EXON 1|1-308:0| SW:ID EFTS_AGRT5 SW:DE RecName: Full=Elongation factor Ts; Short=EF-Ts; SW:GN Name=tsf; OrderedLocusNames=Atu1375; ORFNames=AGR_C_2541; SW:KW Complete proteome; Cytoplasm; Elongation factor; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->308|EFTS_AGRT5|e-158|100.0|308/308| GO:SWS:NREP 3 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003746|"GO:translation elongation factor activity"|Elongation factor| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 12->27|PS01126|EF_TS_1|PDOC00867| PROS 75->85|PS01127|EF_TS_2|PDOC00867| SEG 202->217|raeevdaavaerernv| BL:PDB:NREP 1 BL:PDB:REP 3->307|1efuB|5e-50|43.4|279/282| RP:PDB:NREP 1 RP:PDB:REP 6->195|1aipC|8e-47|35.6|177/195| RP:PFM:NREP 2 RP:PFM:REP 8->41|PF00627|1e-05|60.6|33/37|UBA| RP:PFM:REP 57->288|PF00889|6e-31|46.5|215/215|EF_TS| HM:PFM:NREP 2 HM:PFM:REP 57->289|PF00889|3.8e-75|50.9|220/221|EF_TS| HM:PFM:REP 4->41|PF00627|1.1e-15|37.8|37/37|UBA| GO:PFM:NREP 3 GO:PFM GO:0003746|"GO:translation elongation factor activity"|PF00889|IPR014039| GO:PFM GO:0005622|"GO:intracellular"|PF00889|IPR014039| GO:PFM GO:0006414|"GO:translational elongation"|PF00889|IPR014039| RP:SCP:NREP 3 RP:SCP:REP 4->55|1xb2B1|1e-20|30.8|52/56|a.5.2.2| RP:SCP:REP 54->148|1xb2B2|3e-24|42.1|95/111|d.43.1.1| RP:SCP:REP 146->288|1aipC2|1e-30|32.6|138/143|d.43.1.1| HM:SCP:REP 4->55|1aipC1|2.6e-19|71.2|52/52|a.5.2.2|1/1|UBA-like| HM:SCP:REP 57->289|1tfeA_|7.4e-51|50.7|140/142|d.43.1.1|1/1|Elongation factor Ts (EF-Ts), dimerisation domain| OP:NHOMO 1085 OP:NHOMOORG 1004 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1111111111111111111111111-11-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111 -1--111-311-111--------------------------------------------------------------------------131-111-11----1-1-141212111-112-1112-1215B1-211-1-11-11--11111-11---12111111111111-1112222S222225242-241211-12 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 307 STR:RPRED 99.7 SQ:SECSTR HccccHHHHHHHHHHHcccHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHTTccccccEEEEcTTccEEEEEEEEcccHHHHTcHHHHHHHHHHHHHHHHHcccccccccTTccHHHHHHHHHTTTccHHHHHHHHHHHHHHHHHHcTTTcccTTcEEcccHTTccHHHHHHHHHHHHHcHHHccccEEEEEEHccccccGGGccHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHcTTTcEETTEEEEEHHHHHHTHHHHHcTTcEEEEEEEEETTTTcccccccHHHHHHHHcc# DISOP:02AL 1-1,114-119,217-229,308-309| PSIPRED cccccHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccEEEEEEEEccccHHHccHHHHHHHHHHHHHHHHHccccHHHHHHccccccccHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHcccHHcccccccHHHHHHHHHHHHccccEEEEEEEEEEccccHHHHccHHHHHHHHHcc //