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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : tuf.1
DDBJ      :tuf          elongation factor TU
Swiss-Prot:EFTU_AGRT5   RecName: Full=Elongation factor Tu;         Short=EF-Tu;

Homologs  Archaea  68/68 : Bacteria  912/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
b.43.3b.44.1c.37.1
:391 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->391 1b23P PDBj e-144 66.4 %
:RPS:PDB   7->390 2bvnB PDBj 3e-76 66.8 %
:RPS:SCOP  10->199 1aipA3  c.37.1.8 * 1e-36 67.4 %
:RPS:SCOP  192->298 1darA1  b.43.3.1 * 5e-11 7.7 %
:RPS:SCOP  299->391 1aipA2  b.44.1.1 * 8e-26 75.3 %
:HMM:SCOP  7->223 1f60A3 c.37.1.8 * 1e-67 40.1 %
:HMM:SCOP  202->298 1s0uA1 b.43.3.1 * 6.7e-32 48.5 %
:HMM:SCOP  295->391 1efcA2 b.44.1.1 * 3.5e-34 51.5 %
:RPS:PFM   14->196 PF00009 * GTP_EFTU 7e-31 43.0 %
:RPS:PFM   302->389 PF03143 * GTP_EFTU_D3 3e-08 34.1 %
:HMM:PFM   10->198 PF00009 * GTP_EFTU 1.6e-63 44.9 178/189  
:HMM:PFM   295->389 PF03143 * GTP_EFTU_D3 3.3e-40 62.1 95/101  
:HMM:PFM   222->291 PF03144 * GTP_EFTU_D2 9e-18 40.6 69/74  
:BLT:SWISS 1->391 EFTU_AGRT5 0.0 100.0 %
:PROS 46->61|PS00301|EFACTOR_GTP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87709.1 GT:GENE tuf.1 GT:PRODUCT elongation factor TU GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1916029..1917204) GB:FROM 1916029 GB:TO 1917204 GB:DIRECTION - GB:GENE tuf GB:PRODUCT elongation factor TU GB:PROTEIN_ID AAK87709.1 GB:DB_XREF GI:15157072 GB:GENE:GENE tuf LENGTH 391 SQ:AASEQ MAKSKFERNKPHVNIGTIGHVDHGKTSLTAAITKYFGEFKAYDQIDAAPEEKARGITISTAHVEYETPARHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQVGVPAIVVFLNKVDQVDDAELLELVELEVRELLSSYDFPGDDIPIIKGSALAALEDSDKKIGEDAIRELMAAVDAYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALVRGVTRDGVERGQILCKPGSVKPHKKFMAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVSLPEGTEMVMPGDNVTVEVELIVPIAMEEKLRFAIREGGRTVGAGIVASIVE GT:EXON 1|1-391:0| SW:ID EFTU_AGRT5 SW:DE RecName: Full=Elongation factor Tu; Short=EF-Tu; SW:GN Name=tufA; OrderedLocusNames=Atu1948; ORFNames=AGR_C_3557;andName=tufB; OrderedLocusNames=Atu1966; ORFNames=AGR_C_3583; SW:KW Complete proteome; Cytoplasm; Elongation factor; GTP-binding;Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->391|EFTU_AGRT5|0.0|100.0|391/391| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0003746|"GO:translation elongation factor activity"|Elongation factor| GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 46->61|PS00301|EFACTOR_GTP|PDOC00273| SEG 140->153|ellelvelevrell| SEG 227->246|grvergivkvgeeveivgir| BL:PDB:NREP 1 BL:PDB:REP 2->391|1b23P|e-144|66.4|390/405| RP:PDB:NREP 1 RP:PDB:REP 7->390|2bvnB|3e-76|66.8|371/372| RP:PFM:NREP 2 RP:PFM:REP 14->196|PF00009|7e-31|43.0|172/183|GTP_EFTU| RP:PFM:REP 302->389|PF03143|3e-08|34.1|88/103|GTP_EFTU_D3| HM:PFM:NREP 3 HM:PFM:REP 10->198|PF00009|1.6e-63|44.9|178/189|GTP_EFTU| HM:PFM:REP 295->389|PF03143|3.3e-40|62.1|95/101|GTP_EFTU_D3| HM:PFM:REP 222->291|PF03144|9e-18|40.6|69/74|GTP_EFTU_D2| GO:PFM:NREP 3 GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF03143|IPR004160| RP:SCP:NREP 3 RP:SCP:REP 10->199|1aipA3|1e-36|67.4|172/180|c.37.1.8| RP:SCP:REP 192->298|1darA1|5e-11|7.7|104/118|b.43.3.1| RP:SCP:REP 299->391|1aipA2|8e-26|75.3|93/93|b.44.1.1| HM:SCP:REP 7->223|1f60A3|1e-67|40.1|207/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 202->298|1s0uA1|6.7e-32|48.5|97/0|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 295->391|1efcA2|3.5e-34|51.5|97/97|b.44.1.1|1/1|EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain|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a4BEA66365B72E39789AKV7C797ED9MFC8BD8AB*DBABCSIZQ6HCBBD7778 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 391 STR:RPRED 100.0 SQ:SECSTR TccccccccccEEEEEEEccTTccHHHHHHHHHHHHcccccHHHHHcHHHHcccTTTTcTTEEEEEccccEEEEEEccccGGGHHHHHHHHTTcccEEEEEETTTcccHHHHHHHHHHHHHTcccEEEEEEcGGGcccHHHHHHHHHHHHHHHHHTTccTTTccEEEccHHHHHTTcHHHHHHHHHHHHHHHHHHHcccccccTTcccEEEcccEEEETTTEEEEEEEccccEEETTcEEEEEcccccEEEEEEEEEETTEEEcEEETTcEEEEEEEcccGGGccTTcEEEcTTccEEEEEEEEEEEEccGGGTcccccEETTcccEEEETTEEEEEEEEccTTccEEcTTcEEEEEEEEEEEEEEcTTcEEEEEETTEEEEEEEEEEEcc DISOP:02AL 1-6| PSIPRED ccHHHHHccccEEEEEEEEEEcccHHHHHHHHHHHccccHHHHHHcccHHHHHcccEEEEEEEEEEccccEEEEEEcccHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccccccHHHHHHHHHHHccccccccccccEEEEEEEEccccEEEEEEEEEEEEEEEcccEEEEEEccccEEEEEEEEEEccEEEcccccccEEEEEEccccHHHEEEcEEEEcccccccccEEEEEEEEEEEEEcccccEEEccccEEEEEEEEEEEEEEEEccccHHcccccEEEEEEEEcccEEEccccEEEEEEccEEEEEEEEEEEEc //