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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : xdhC
DDBJ      :xdhC         xanthine dehydrogenase chaperone
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  143/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.194.1
:290 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  2->131 1t8hA  d.194.1.2 * 2e-13 15.4 %
:HMM:SCOP  102->176 1i0zA1 c.2.1.5 * 0.00012 25.3 %
:HMM:PFM   15->75 PF02625 * XdhC_CoxI 1.3e-20 41.0 61/71  
:HMM:PFM   124->178 PF03721 * UDPG_MGDP_dh_N 0.00076 23.6 55/185  
:BLT:SWISS 21->245 YQEB_ECOLI 1e-06 23.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88054.1 GT:GENE xdhC GT:PRODUCT xanthine dehydrogenase chaperone GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2288977..2289849 GB:FROM 2288977 GB:TO 2289849 GB:DIRECTION + GB:GENE xdhC GB:PRODUCT xanthine dehydrogenase chaperone GB:PROTEIN_ID AAK88054.1 GB:DB_XREF GI:15157476 GB:GENE:GENE xdhC LENGTH 290 SQ:AASEQ MRGPAPMPDTSLSTFLARPAPTILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEYMAIDHARAMLRTGAAEDRMDIPLGPEIGQCCGGRTLIRFRLITAEIAATLEARLKGEAEQQPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELRDIPAGIASILTPMPEAFVQKIPANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAKLTLPIGGTGVRDKRPAVIAALVAAELLQAFSVAETRRSENRHDHPQGQDRA GT:EXON 1|1-290:0| BL:SWS:NREP 1 BL:SWS:REP 21->245|YQEB_ECOLI|1e-06|23.8|206/541| SEG 135->147|aladalsllpltl| SEG 255->268|aviaalvaaellqa| HM:PFM:NREP 2 HM:PFM:REP 15->75|PF02625|1.3e-20|41.0|61/71|XdhC_CoxI| HM:PFM:REP 124->178|PF03721|0.00076|23.6|55/185|UDPG_MGDP_dh_N| RP:SCP:NREP 1 RP:SCP:REP 2->131|1t8hA|2e-13|15.4|130/272|d.194.1.2| HM:SCP:REP 102->176|1i0zA1|0.00012|25.3|75/0|c.2.1.5|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 158 OP:NHOMOORG 143 OP:PATTERN -------------------------------------------------------------------- --1----------------------------------------------------1------------11------------------------------------------------------------------------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------1111111-1--1------------------------------------111-------------1-----11111111111---------11--111111111111------11-----21111111111111--------------------------------------------2222222111122221111112221111--11111111111-1--1------------------1-------------------111-------1-1-------------------------------1--1-1-----------------------------------------------------------------------------------------------1------------------------------------111---------------1111111---1111111111111111111-------------1---------------------------1----------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 272-290| PSIPRED ccccccccHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHccccccEEEEcccHHHccccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccccccccEEEEccccHHHHHHcccccEEEEEEccccHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccc //