[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Bacteriophage 44RR2.8t (bp441)
Gene : 11
DDBJ      :11           baseplate wedge subunit and tail pin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  5/175   --->[See Alignment]
d.182.1
:220 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->193 1el6A PDBj 1e-17 31.1 %
:RPS:SCOP  13->219 1el6A  d.182.1.1 * 8e-60 27.6 %
:HMM:SCOP  13->220 1el6A_ d.182.1.1 * 2.6e-67 49.5 %
:RPS:PFM   2->219 PF08677 * GP11 3e-44 50.0 %
:HMM:PFM   2->219 PF08677 * GP11 1.1e-84 48.6 214/218  
:BLT:SWISS 13->193 VG11_BPT4 3e-17 31.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81465.1 GT:GENE 11 GT:PRODUCT baseplate wedge subunit and tail pin GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION 89349..90011 GB:FROM 89349 GB:TO 90011 GB:DIRECTION + GB:GENE 11 GB:PRODUCT baseplate wedge subunit and tail pin GB:NOTE similar to T4 accession NP_049769.1; interface protein between baseplate wedge and gp12 short tail fibers; gp11 GB:PROTEIN_ID AAQ81465.1 GB:DB_XREF GI:34732927 GB:GENE:GENE 11 LENGTH 220 SQ:AASEQ MITKARGGAMNTSRHATHIEYLTKPGTDVMGARNIGGPTVDSLIAGVDYHNVQSAIDELQTLASFPINGLYISDVKASPEGVRQAELLTFSGVVTDSEEGKSIIHVYGIPFTVDAGTNADVICNQVLAKFEDMRDNGILFFSVNRQSGTTTPVLEVQFLDSATHVNIENFVSNGITVAREVSVPGVPGFGTWDYLGEETKTLTGGTLADPVRLYYFKRIG GT:EXON 1|1-220:0| BL:SWS:NREP 1 BL:SWS:REP 13->193|VG11_BPT4|3e-17|31.1|177/219| SEG 195->207|lgeetktltggtl| BL:PDB:NREP 1 BL:PDB:REP 13->193|1el6A|1e-17|31.1|177/208| RP:PFM:NREP 1 RP:PFM:REP 2->219|PF08677|3e-44|50.0|214/218|GP11| HM:PFM:NREP 1 HM:PFM:REP 2->219|PF08677|1.1e-84|48.6|214/218|GP11| RP:SCP:NREP 1 RP:SCP:REP 13->219|1el6A|8e-60|27.6|203/208|d.182.1.1| HM:SCP:REP 13->220|1el6A_|2.6e-67|49.5|204/208|d.182.1.1|1/1|Baseplate structural protein gp11| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1-------------------------------111-1--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 178 STR:RPRED 80.9 SQ:SECSTR ############cccGGGccccccTTcccTTTccTTcccHHHHTTTcccccHHHHHHHHHHHHcccTTcEEEEcccccccccccEEEEEEEEccccTTTTcEEEEETTEEEEEETTccHHHHHHHHHHHHHHHHHTG##TccEEEEccccTTEEEEEEccccccc#cccEEETTEEEEEEEEEccccccccEE########################### DISOP:02AL 1-9| PSIPRED ccccccccccccccHHHHcEEEcccccccccccccccccHHHHHHccccccHHHHHHHHHHHHccccccEEEEEcccccccccEEEEEEEEEEEEcccccEEEEEEEEEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccEEEEEEccccccccccccccccEEEEEEEEcccccccccHHHccccccEEEccEEcccEEEEEEEEcc //