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Bacteriophage 44RR2.8t (bp441)
Gene : 17
DDBJ      :17           terminase DNA packaging enzyme large subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  10/175   --->[See Alignment]
c.37.1e.35.1
:613 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->566 3cpeA PDBj 0.0 64.7 %
:RPS:PDB   366->571 3c6aA PDBj 3e-39 65.2 %
:RPS:SCOP  33->289 1rifA  c.37.1.23 * 7e-05 11.7 %
:RPS:SCOP  379->438 1jmu.1  e.35.1.1 * 7e-05 8.6 %
:HMM:SCOP  118->279 1z63A1 c.37.1.19 * 2.8e-06 18.7 %
:RPS:PFM   213->477 PF03237 * Terminase_6 1e-12 28.4 %
:HMM:PFM   150->565 PF03237 * Terminase_6 1.5e-65 24.0 359/384  
:BLT:SWISS 4->613 TERL_BPT4 0.0 63.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81472.1 GT:GENE 17 GT:PRODUCT terminase DNA packaging enzyme large subunit GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION 96309..98150 GB:FROM 96309 GB:TO 98150 GB:DIRECTION + GB:GENE 17 GB:PRODUCT terminase DNA packaging enzyme large subunit GB:NOTE DNA packaging enzyme, nuclease and ATPase activity; binds ssDNA, gp16 and gp20; similar to T4 accession NP_049776.1; T4 gene synonym: q; gp17 GB:PROTEIN_ID AAQ81472.1 GB:DB_XREF GI:34732934 GB:GENE:GENE 17 LENGTH 613 SQ:AASEQ MAAVYTDDHPLGMPHPSTLKREMREDGEWVLSNHDDKWYPSTFDRYMKLQGVKRVKIQSDDPSMFRTFKDKTNKRTRYLGLPNLKRANIKIKWTKEMLAERKRCKEDIVYFAENYCCIEHIDYGIIRVQLRDYQKDMLRIMAGNRLMAANLSRQLGKTTVVAIFLAHFVCFNSAKNVGILAHKASMSAEVLHRTKQALELLPDFLQPGIVEWNKGSITLGNGCAIGAFSSSPDAVRGNSFALIYVDEVAFIPNFTDAWMAIQPVISSGRRSKILMTTTPNGLNHWYDIWTAAITPNSSGDGSKSGFVPYTATWSSVKERLYSDGKELSGSDSYFDDGYSWSSKTIAGSALDAFQQEHNTAFQGTSGTLINGTKLSKLNWIDIPPQDNFTMFEEPKEGRKYIATLDSAEGRGQDYHAMHIFDITEFPYKQVAVYHSNTTSHLILPDVLLKYLNMYFQPYIYIELNSTGVSIAKSLYSELDYENVICDSYQDLGLKQTKRSKAIGCSTLKDLIEKDKLILNHKKSIMELRTFSEKGVSWAAEEGFHDDLVMSLVIFAWLTTQERFSDFTENDDMRLANEVFRKEMEELNDDYMPMVIVDDGEDTFEVTHKGMSFV GT:EXON 1|1-613:0| BL:SWS:NREP 1 BL:SWS:REP 4->613|TERL_BPT4|0.0|63.7|595/610| SEG 328->342|sgsdsyfddgyswss| SEG 507->518|lkdliekdklil| BL:PDB:NREP 1 BL:PDB:REP 7->566|3cpeA|0.0|64.7|546/553| RP:PDB:NREP 1 RP:PDB:REP 366->571|3c6aA|3e-39|65.2|198/198| RP:PFM:NREP 1 RP:PFM:REP 213->477|PF03237|1e-12|28.4|232/365|Terminase_6| HM:PFM:NREP 1 HM:PFM:REP 150->565|PF03237|1.5e-65|24.0|359/384|Terminase_6| RP:SCP:NREP 2 RP:SCP:REP 33->289|1rifA|7e-05|11.7|247/282|c.37.1.23| RP:SCP:REP 379->438|1jmu.1|7e-05|8.6|58/641|e.35.1.1| HM:SCP:REP 118->279|1z63A1|2.8e-06|18.7|155/0|c.37.1.19|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 19 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------2----------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------1--1---------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1-1-------------1---11----------11114--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 568 STR:RPRED 92.7 SQ:SECSTR ###ccccccTTccccGGGccEEEETTEEEEEcTTTccEEEccHHHHHTTccccccccccccTTcTTTccccccTTTcGGGcTTcccTTccccccHHHHHHHHHHHTcHHHHHHHTcccccTTTccccccccHHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHHHHTccccEEEEEEccHHHHHHHHHHHHHHHTTccTTTcccEEEEcccEEEETTccEEEEEEccHHHHHHccccEEEEETGGGcTTHHHHHHHHHHHHccccccEEEEEEcccTTcHHHHHHHHHHTTccccEEEEEcGGGcGGGGccTTccccTTHHHHHHHHTTccHHHHHHHHccccTTcccccccHHHHTTccccccccHHHHHHcccccccccTTEEEcccccTTccEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEccccTTTHHHHHHHHHHHTTcccEEEcccHHHHHHHHHHHHTccccccccccTTcccccccHHHHHHHHHHHHHHHHTTcEEcccHHHHHHHHHccccTTEEEcccccccHHHHHHHHHHHHHTcGGGGGTccccc########################################## DISOP:02AL 1-2,299-299| PSIPRED cccccccccccccccccHHHHHHHcccEEEEEcccccccHHHHHHHHHHcccEEEEcccccHHHHHHHHccccccHHHccccccccccccccccHHHHHHHHHHHHcHHHHHHHHcccccccccEEEEEccHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHccccEEccccEEEEccccEEEEEEEcccccccccccEEEEEcccccccHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHcccccccccccEEEEEEEEcccccccccccccccccccccccccccHHHHHcccHHHHHHHHccccccccccEEEEEEccHHHccccccccccEEEEccccccEEEEEEEEcccccccccEEEEEEcccccEEEEEEHHcccccHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccccccccccHHHcccccccccccHHHHHHHHHHHHcccEEEHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccc //