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Bacteriophage 44RR2.8t (bp441)
Gene : 20
DDBJ      :20           portal vertex protein of head
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  10/175   --->[See Alignment]
b.34.10d.103.1d.58.4
:516 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  51->128 1cbyA  d.103.1.1 * 1e-15 23.1 %
:RPS:SCOP  296->383 1ixdA  b.34.10.1 * 2e-17 16.3 %
:RPS:SCOP  384->480 2op5A1  d.58.4.22 * 3e-17 15.6 %
:RPS:PFM   20->487 PF07230 * Phage_T4_Gp20 e-142 63.0 %
:HMM:PFM   1->501 PF07230 * Phage_T4_Gp20 1.3e-236 56.0 498/501  
:BLT:SWISS 1->515 VG20_BPT4 e-167 59.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81475.1 GT:GENE 20 GT:PRODUCT portal vertex protein of head GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION 100787..102337 GB:FROM 100787 GB:TO 102337 GB:DIRECTION + GB:GENE 20 GB:PRODUCT portal vertex protein of head GB:NOTE head initiation complex; connects head to neck; similar to T4 accession NP_049782.1; gp20 GB:PROTEIN_ID AAQ81475.1 GB:DB_XREF GI:34732937 GB:GENE:GENE 20 LENGTH 516 SQ:AASEQ MKFLDLFKFWDRVDQNEYDERLKLGHESIATPKKDDGATEIETREGEATYNAVMQQFFGIDNNISGTKDLINTYRQLINNPEVERAVANIVNEAIVYERGHKVVSLDLDDTDFGSNVKEKILEEFDEVCRLLDASRKLDTLFRRWYVDSRIFFHKIMPNPKKGIAELRRLDPRFMEYYREIVTSDIGGTTIVKGYREFFIYTTGNEGYSYNGRIFEPNTRIKIPRSAVVYASSGLMDCSDRGIIGYLHNAVKPANQLKLLEDAMVIYRITRAPERRVFYIDVGNMNNRKATEYVNGIMQSLKNRVVYDSNTGTVKNQKRNLSMTEDYWLMRRDGKSVTEVSSLPGAQTMGDMDDVRWFNKKLYEALRIPLSRIPRDDGGMVIGGQDTAITRDELDFRKFVVQLQHDFEEIFLDPLKTNLIYKRIITEDEWDEQINNIKVNFHQDSYYTELKDIETLRLRVDALSQIEPYVGKYVSHDYVMKNILQMTEEQIAQEEKQIEQEAGIKRFQNPENEDDF GT:EXON 1|1-516:0| BL:SWS:NREP 1 BL:SWS:REP 1->515|VG20_BPT4|e-167|59.0|515/524| SEG 488->502|eeqiaqeekqieqea| RP:PFM:NREP 1 RP:PFM:REP 20->487|PF07230|e-142|63.0|449/465|Phage_T4_Gp20| HM:PFM:NREP 1 HM:PFM:REP 1->501|PF07230|1.3e-236|56.0|498/501|Phage_T4_Gp20| RP:SCP:NREP 3 RP:SCP:REP 51->128|1cbyA|1e-15|23.1|78/227|d.103.1.1| RP:SCP:REP 296->383|1ixdA|2e-17|16.3|86/104|b.34.10.1| RP:SCP:REP 384->480|2op5A1|3e-17|15.6|96/112|d.58.4.22| OP:NHOMO 10 OP:NHOMOORG 10 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1-1-------------1---11----------11111--------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 19-27,489-517| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccccEEEEEEccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHcHHHHHcccHHHHHHHHHHccccccccEEEEEEEEEEEEcccccccccccccccccccEEEcHHHHEEccccccccccccEEHHHHHHHHHHHHHHHHHHHHEEEEEEcccccEEEEEEccccccHHHHHHHHHHHHHHccEEEEEccccccccHHHHHHHHHHHcccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHcccHHHccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccc //