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Bacteriophage 44RR2.8t (bp441)
Gene : 27
DDBJ      :27           baseplate hub subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  4/175   --->[See Alignment]
b.106.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->362 2z6bD PDBj 6e-94 46.3 %
:RPS:SCOP  2->198 1k28D1  b.106.1.1 * 6e-92 45.9 %
:RPS:SCOP  203->362 1k28D2  b.106.1.1 * 1e-70 47.0 %
:HMM:SCOP  2->198 1k28D1 b.106.1.1 * 2e-91 63.3 %
:HMM:SCOP  199->370 1k28D2 b.106.1.1 * 6.2e-83 58.7 %
:RPS:PFM   3->198 PF09097 * Phage-tail_1 4e-74 68.7 %
:RPS:PFM   205->362 PF09096 * Phage-tail_2 3e-56 62.0 %
:HMM:PFM   3->198 PF09097 * Phage-tail_1 1.8e-111 71.8 195/195  
:HMM:PFM   201->366 PF09096 * Phage-tail_2 1.9e-90 62.0 166/168  
:BLT:SWISS 1->362 VG27_BPT4 1e-97 46.8 %

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81499.1 GT:GENE 27 GT:PRODUCT baseplate hub subunit GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION 117778..118893 GB:FROM 117778 GB:TO 118893 GB:DIRECTION + GB:GENE 27 GB:PRODUCT baseplate hub subunit GB:NOTE similar to T4 accession NP_049803.1; gp27 GB:PROTEIN_ID AAQ81499.1 GB:DB_XREF GI:34732962 GB:GENE:GENE 27 LENGTH 371 SQ:AASEQ MLQRAGYPNVSIKLYQNYDAWLENRFIELAATFVTLTMRDGLMNGINEGLLQIYDANNLQTKLTGDEIIQTSLKTANTEITYNRLYGIKHIGASVDMKGDNIITFQLGSMHYVKNLKFSRMFTNNAVVSVQEMMDYIYNDQVKLMPPFQSVNTRVPMTNWVLGINDYFNFIRKFGQTVEREHIPLVWEDMEGLHISDFAEMQSKEPISYIVTEPRLLGETISMIDHKVCFDFEWLTKANGYTRNPYKNMSFYAHSFIDKRQTRVVTGEGLNATSISRSGAYYDQIDRSGSEEYNRMLTFSQYDAYCSAKTYGEFGLTPGKKLEFYDKKNQFLGEYFVDEVIHEISREQSITSMFMFNNSVKITNHEERQIS GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 1->362|VG27_BPT4|1e-97|46.8|361/391| BL:PDB:NREP 1 BL:PDB:REP 2->362|2z6bD|6e-94|46.3|354/368| RP:PFM:NREP 2 RP:PFM:REP 3->198|PF09097|4e-74|68.7|195/195|Phage-tail_1| RP:PFM:REP 205->362|PF09096|3e-56|62.0|158/168|Phage-tail_2| HM:PFM:NREP 2 HM:PFM:REP 3->198|PF09097|1.8e-111|71.8|195/195|Phage-tail_1| HM:PFM:REP 201->366|PF09096|1.9e-90|62.0|166/168|Phage-tail_2| RP:SCP:NREP 2 RP:SCP:REP 2->198|1k28D1|6e-92|45.9|196/197|b.106.1.1| RP:SCP:REP 203->362|1k28D2|1e-70|47.0|151/167|b.106.1.1| HM:SCP:REP 2->198|1k28D1|2e-91|63.3|196/197|b.106.1.1|1/1|Phage tail proteins| HM:SCP:REP 199->370|1k28D2|6.2e-83|58.7|172/176|b.106.1.1|1/1|Phage tail proteins| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1-------------------------------1-1-1--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 357 STR:RPRED 96.2 SQ:SECSTR #cccTTccccEEEEEccHHHHTTTcccccTTcEEEEEEEEETT#ccEEEEEEEccTTccTTTcccccEEEEEEcccccTccEEEEEEEEEEcccccccccccEEEEEEcTTTTTTccccccccccHHHHHHHHHHHHTcccTTTcccEEcccEEcccccccccHHHHHHHHHTTcEETTTcccEEEEEETTEEEEEEHHHHHTcccc###cccEEEEccccccccccEEEEEEEEEccccGGGcGGGcEEEEEEcTTcccccEEEcTTccEEEEEEccGGGGGccccccHHHHHHHHHHHTccEEEEEEEEccTTccTTcEEEEEcTTccccccEEEEEEEEEEcccccEEEEEEEEccccc######### DISOP:02AL 1-5,364-372| PSIPRED cccccccccEEEEEEccHHHHHcccEEEEEEEEEEEEEEcHHHccccccEEEEEEcccEEEEEcHHEEEEEEEcccccHHHHHEEEEEEEEEEEEEcccccEEEEEEccEEEEEEEccccccccHHHHHHHHHHHHHHcccEEEccccccccEEEccccccccHHHHHHHHHHHHHHHccccEEEEEEcccccccccHHHHHccccccEEEEcHHHHHHHHHHccccEEEEEEEEEccccccccccccEEEEEEEEEcccccEEEEEccccEEEEEEcccccccEEcHHHHHHHHHHHHHHcccEEEEEEEEEcccccccEEEEEcHHHHHHHccHHHHHHHHHHccccEEEEEEEcccEEEEEccccccc //