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Bacteriophage 44RR2.8t (bp441)
Gene : 29
DDBJ      :29           baseplate hub subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  0/915 : Eukaryota  0/199 : Viruses  4/175   --->[See Alignment]
a.114.1
:566 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  438->484 1dg3A1  a.114.1.1 * 3e-04 33.3 %
:RPS:PFM   404->529 PF05087 * Rota_VP2 1e-04 27.7 %
:HMM:PFM   195->266 PF10474 * DUF2451 0.001 15.3 72/234  
:HMM:PFM   323->559 PF10243 * MIP-T3 1.8e-05 20.7 232/538  
:BLT:SWISS 36->518 VG29_BPT4 1e-29 27.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81501.1 GT:GENE 29 GT:PRODUCT baseplate hub subunit GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION 119427..121127 GB:FROM 119427 GB:TO 121127 GB:DIRECTION + GB:GENE 29 GB:PRODUCT baseplate hub subunit GB:NOTE tail length determinator; similar to T4 accession NP_049805.1; gp29 GB:PROTEIN_ID AAQ81501.1 GB:DB_XREF GI:34732964 GB:GENE:GENE 29 LENGTH 566 SQ:AASEQ MTTSLRDLRRQKQQNDATKNLASDVQKAVNQPPNGDSLAAQELIAETVEQGNNELRQIKANTASLHDTAAATELGAESTEMSNTILREISETGKQTFSKLSEFAERLKGSFSADDVEQTPIRAASSSDQAIQIINEENPEPENPLVGYLRTISEDIKFLRENKNEPSDPKDPDVVPDDKDDLKTMIDRIGDQIVKSVDSGFKRTVNIADSISSTLFKYTITAALNFAKMAALVLSLIIAFDVLSRHFSHWTQMFQEQYAEFKETLGSFGTPFENLTGIVTDLVNYFKSDEYLKMFVRLAEGAADQMIYIVNMMMVGLAKLGAAILRALGADDKADTLEASAISVATKTVGYTPSEEEEATIGRVRKRQAQEEAEQSEASWWEKKKREWDGKPIETDEEKAVRERKKSIAENTTAEQFGKHDALSQKIQHVGVTAEKNETSNELLGKHRELLEKRASDVEQAKQSGEITTESYKQLKVEIEKQREFLDAHEQKLLKPKASIKPAPEPEIGVVGSIAKEEKRVEASQTAKQEAASNYNTNANIVKNNNQTLVQAPRTSSPGPGIGNHL GT:EXON 1|1-566:0| BL:SWS:NREP 1 BL:SWS:REP 36->518|VG29_BPT4|1e-29|27.2|474/590| TM:NTM 2 TM:REGION 223->245| TM:REGION 300->322| SEG 135->144|neenpepenp| SEG 168->181|dpkdpdvvpddkdd| SEG 368->382|qaqeeaeqseaswwe| RP:PFM:NREP 1 RP:PFM:REP 404->529|PF05087|1e-04|27.7|112/880|Rota_VP2| HM:PFM:NREP 2 HM:PFM:REP 195->266|PF10474|0.001|15.3|72/234|DUF2451| HM:PFM:REP 323->559|PF10243|1.8e-05|20.7|232/538|MIP-T3| GO:PFM:NREP 2 GO:PFM GO:0003723|"GO:RNA binding"|PF05087|IPR007779| GO:PFM GO:0019013|"GO:viral nucleocapsid"|PF05087|IPR007779| RP:SCP:NREP 1 RP:SCP:REP 438->484|1dg3A1|3e-04|33.3|45/300|a.114.1.1| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1-------------------------------1-1-1--------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-9,82-82,84-97,121-142,163-168,170-172,361-382,394-420,495-536,565-567| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEcccEEEEEccccccccccccccc //