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Bacteriophage 44RR2.8t (bp441)
Gene : 30
DDBJ      :30           DNA ligase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  6/915 : Eukaryota  0/199 : Viruses  6/175   --->[See Alignment]
b.40.4d.142.2
:501 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   130->482 1a0iA PDBj 2e-20 18.2 %
:RPS:SCOP  155->371 1b04A  d.142.2.2 * 2e-13 18.0 %
:RPS:SCOP  375->459 1fviA1  b.40.4.6 * 2e-04 18.8 %
:HMM:SCOP  129->369 1a0iA2 d.142.2.1 * 2.3e-27 25.3 %
:HMM:SCOP  342->426 1fviA1 b.40.4.6 * 3.4e-08 22.1 %
:HMM:PFM   136->369 PF01068 * DNA_ligase_A_M 8.5e-25 28.4 194/202  
:BLT:SWISS 4->497 DNLI_BPT6 3e-87 42.6 %

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81508.1 GT:GENE 30 GT:PRODUCT DNA ligase GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(128319..129824) GB:FROM 128319 GB:TO 129824 GB:DIRECTION - GB:GENE 30 GB:PRODUCT DNA ligase GB:NOTE similar to T4 accession NP_049813.1; T4 gene synonym: lig; ATP-dependent DNA ligase; gp30 GB:PROTEIN_ID AAQ81508.1 GB:DB_XREF GI:34732971 GB:GENE:GENE 30 LENGTH 501 SQ:AASEQ MTHILDILNSLAATDSTKEKEKILGQHKGNALLETVFKLAYNKRLTYGITPKGLRFIGSVGPMSLEQFCDELVSKYSTRNLTGNAGFNYMQQMLDSMTSASCEVARRILARDLECGASVALGNKTWPGIIPEQPCFLAESFSLKALAKIIFPAFAQLKADGSRSMAIISVDGEEINIVSRGGNEYIGLVDIKAQLKEIAGALNGKLGDFVVDGELVHNPHRKPVKTPKQHTLDDLFGLEEITEEPGQESDRNKSNGLGNKSLNGTLTAEEQSEMLFNVWDIVPADVYFGKRKCFMECEDRFNLLKELVGDTGSMKYSNIELIECEEVENYEEALEIYRRNVQRDREGIILKNKHGMWVDARTADQIKFKEEIEIDLLIVDVYPHKKHPNKVGGITVQDASGNIQVNCGSGFKDTTHRKINGKKVEIPLSERHEYDRELLMTQIDQLKGSIAQLKCNGLQTRKGRKPHEPKYKLFLPIFQLIRHDKKVANHIHDVFPDAILD GT:EXON 1|1-501:0| BL:SWS:NREP 1 BL:SWS:REP 4->497|DNLI_BPT6|3e-87|42.6|470/487| RP:PDB:NREP 1 RP:PDB:REP 130->482|1a0iA|2e-20|18.2|318/332| HM:PFM:NREP 1 HM:PFM:REP 136->369|PF01068|8.5e-25|28.4|194/202|DNA_ligase_A_M| RP:SCP:NREP 2 RP:SCP:REP 155->371|1b04A|2e-13|18.0|189/310|d.142.2.2| RP:SCP:REP 375->459|1fviA1|2e-04|18.8|64/80|b.40.4.6| HM:SCP:REP 129->369|1a0iA2|2.3e-27|25.3|225/0|d.142.2.1|1/1|DNA ligase/mRNA capping enzyme, catalytic domain| HM:SCP:REP 342->426|1fviA1|3.4e-08|22.1|77/104|b.40.4.6|1/1|Nucleic acid-binding proteins| OP:NHOMO 12 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------1----1------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1---------------1---------------111-1--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 75.4 SQ:SECSTR ############################################################################################################HHHHHHHHHHHHHTcccc###cTTcccEEEEEccHHHHHHHHHHHEEEEccccEEEEEEEEETTcEEEEEcTTccccGGGcEEcHHHHHHHHcTTcccTTEEEEEEEEEcEccccTTTHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccccccTTTEEEEEEEEEEHHHHHHcccEEEEHHHHHHHHHHHHHHHHHcTTcEEEEccEEEEccHHHHHHHHHHHHTTTcccEEEEcTTcEEccEEEEEEEEEcccEEEEEEEEEEEcccTTTcccccEEEEcTTccEEcccccHHHHHHHHHHHHHHTTTccccccccEEEEETTEccTTTTcEEEEEEcEEEc###cccccTTccEEccEEEEEcTTccGGGccc######### DISOP:02AL 20-23,54-63| PSIPRED cHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHccHHHEEEcccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHccccccccccccccccccHHHHHccccEEEEEccccEEEEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHcccccccEEEEEEEEEEcccccccccccccHHHHHHHcccHHcHHHHHHHHHHHHHHHHHHccccccHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHccccccccccccccccEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccccEEEEccccEEEEEEEEEccccccccEEEEEEEcccccEEEEccccccHHHHHHHcccccccccccccccccccEEccccccccEEEEEEEcccccccccccccccEEEEccEEEEEEcccccHHHHHHHHcccccc //