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Bacteriophage 44RR2.8t (bp441)
Gene : 34
DDBJ      :34           long tail fiber proximal subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  6/175   --->[See Alignment]
b.2.2
:1222 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  96->151 1g1kA  b.2.2.2 * 3e-06 23.2 %
:HMM:PFM   1118->1160 PF06863 * DUF1254 0.00029 19.5 41/118  
:HMM:PFM   990->1056 PF01077 * NIR_SIR 0.00086 32.4 37/157  
:BLT:SWISS 4->1135,1168->1222 VG34_BPT4 0.0 41.7 %
:REPEAT 5|471->549|550->584|585->633|634->708|731->810
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81537.1 GT:GENE 34 GT:PRODUCT long tail fiber proximal subunit GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION 145295..148963 GB:FROM 145295 GB:TO 148963 GB:DIRECTION + GB:GENE 34 GB:PRODUCT long tail fiber proximal subunit GB:NOTE similar to T4 accession NP_049860.1; gp34 GB:PROTEIN_ID AAQ81537.1 GB:DB_XREF GI:34733000 GB:GENE:GENE 34 LENGTH 1222 SQ:AASEQ MLGQHFRATSGLDAAGEKLINVAIADKATLSDGVNVDFFHKYNTIYQYDPLRGYDAKHAIIYQRRIYFAKADIASPAGEFQPTLWTGLRVDPTWQFVNSVATAMQLVSGQYISADNRFNNLVFNLPTDPIDGDTIVIKDIGGMPGINDLVFSTIGAAIIEYNGQTRGSSFRGTIPFCEYVFMYKAAGNRWQLDICASTEQSYFVAPSTQGFQLQSGMVTWRQTAQGQIRLILPKHANHGDVITTHDIDGLNAINHSTLEIYPGSGHSINENGVTLIESRTSGYGSFVFDSGAKVWEVWDGDQRTRIRVTKADTSVLPFEHILVTGDGTGASQVVTLTLPEDVAIGDRVQITLDYLRRGQTCTIQVKPNSGEVMVGSKAQMQFQRRSEYPATNGWELVSSVSIVANTDYVPYIELMYAELDPALVGVTPARYGWMIGQVAPKVERVDANQRDRLGVAALAAQSEVDKNHEQNPNDETIVTPLTLSRKTSNETRRGILRIGTTAEVNQVTTASYLDDVAITPKKLNERSATETRRGLAEIATQAEANGATDDITIVTPKKLHNRIAAENQTGILAIVQKLGTAGTARNLAGTGIYNRADHLRAVTPATLDEFAATETAKGVGYIATQAEVDGGSSDANGPLLVTAERLAARRASETNHGLIEIATQAETNAGTDDVRAITPKKLNDRTATESRTGIARLATQTEVDAGTSALTLLTPLKLKTRFDNLSRVEVDADAGLTRTGTIWDTVSIGVKLSTEVQRGTLRVATQVEANGSTDDATVITPKKLDGRKSTRTLDGIIRVATTAETRTGTSQTLAVCPQDLIYMAQTEPTWSGNETRRGYVKTATMESTFVGNDTVGSTQVYTSYANDGLAVSPRGLNYALQNFLPLKATAQNSLALGGVNSADWVRRTIAQTVTGAMNFTAAMTAANITSNVTSVSSLRVRDGNLGAVEIGTQGVSVLGTGILMHSADGAGAANDWFMYSGGRSSVLGVNEIGFVSTNADNTSLTKQFSVSRDGDSTTNRHIRSTNGHVVLENSGARIYVGGGIATTNQLAQSITGGFIFGNINSAMSVVTNGDDNFKINGSVVINVANAQTKLDPVYLRRDGGNTQTGKVLAAMTGDVKYSTFRNDNRYISSRGNDFVFGNTDTVNGRVCLDTNKNPIVKIGNFEYEIYHKGNKPTAEDVGAVDITGSSANNLTIRDWIKIGNVKIIANNLLKTVEFVWEE GT:EXON 1|1-1222:0| BL:SWS:NREP 1 BL:SWS:REP 4->1135,1168->1222|VG34_BPT4|0.0|41.7|1153/1289| NREPEAT 1 REPEAT 5|471->549|550->584|585->633|634->708|731->810| SEG 710->720|ltlltplklkt| SEG 916->927|amnftaamtaan| HM:PFM:NREP 2 HM:PFM:REP 1118->1160|PF06863|0.00029|19.5|41/118|DUF1254| HM:PFM:REP 990->1056|PF01077|0.00086|32.4|37/157|NIR_SIR| RP:SCP:NREP 1 RP:SCP:REP 96->151|1g1kA|3e-06|23.2|56/143|b.2.2.2| OP:NHOMO 12 OP:NHOMOORG 8 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---2---------------1---------------122-2--------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4| PSIPRED cccccccccccccccccEEEEEEccccccccccEEEEEEEEccccccccccccccccEEEEEccccEEHHHHccccccccccccEEEEEccccEEEEEcccccEEEccccEEEEEEccccEEEEcccccccccEEEEEcccccccEEEEEEEEccccEEEEccEEEEEEEEEEccccEEEEEEEccccEEEEEEEcccccEEEEcccccccccccccEEEEEEEcccEEEEEccccccccEEEEEEEccccccEEEEEEEEEccccEEEccccEEEEEEccccEEEEEEccccEEEEEEccccEEEEEEEcccccccccEEEEEEcccccEEEEEEEcccccccccEEEEEHHHHccccEEEEEEccccccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEEEEEcccccEEEcccEEEEEEEEEccEEEEccccccccccEEEEccHHHHHcccccccccEEEEcccccccccccccEEEEEEEccccEEEccccccEEEEHHHcccccccccccccEEEEEEEEEcHHEEcccccEEEEcHHHHccEEcccccccEEEEEEEccccccccccccEEEEEcccEEEEEEcccccccccccccccEEEEEEEcEEEcccccccccEEEcHHHHcccccccccEEEEEEEEHHHcccccccEEEEEHHHHcccccccccEEEEEEEEEEEEEccccEEEEEccEEEEEEEcccccccEEccccEEEEcccccccccccccccEEEEEEEEEccHHHccccccccEEEccccccccEEEEEEEEEEEEcccccEEccccccccccHHHHHHHEEccccccccccEEEEEEEcccEEEEcccccccccEEEEEcccccEEEcHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEEEEcccccccEEEEEEEccccccccEEEEEccccccccEEEEcccccccEEccccEEEEcccccEEcccccEEEEEcccccEEEEEccccccccccccccEEEEEccEEEEEccccEEEEccEEEEcccccccccEEEEccccccEEEEcccEEEEEEccEEEEEEcccEEEEccEEEEcccccccccEEEEEEEEEEEEEEEEcccccccccccEEEEccccccccEEEcccccccEEEEccEEEEEEcccccccHHHEEEEcccccccccEEEEEEEEEccEEEEEcccccEEEEEEEc //