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Bacteriophage 44RR2.8t (bp441)
Gene : 43B
DDBJ      :43B          DNA polymerase, C-terminal fragment
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  9/175   --->[See Alignment]
e.8.1
:391 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->390 1q9xA PDBj e-127 56.3 %
:RPS:PDB   27->389 3cfpA PDBj 4e-63 59.4 %
:RPS:SCOP  6->390 1clqA2  e.8.1.1 * 1e-59 58.1 %
:HMM:SCOP  1->391 1clqA2 e.8.1.1 * 3.9e-88 26.2 %
:HMM:PFM   24->374 PF00136 * DNA_pol_B 3.3e-28 19.5 298/467  
:BLT:SWISS 8->390 DPOL_BPR69 e-126 56.3 %
:PROS 106->114|PS00116|DNA_POLYMERASE_B

SeqInfo AminoSeq See neighboring genes
Links DAD DDBJ Abbreviations Back to title page
GT:ID AAQ81354.1 GT:GENE 43B GT:PRODUCT DNA polymerase, C-terminal fragment GT:DATABASE AY375531 GT:ORG bp441 GB:ACCESSION AY375531 GB:LOCATION complement(19996..21171) GB:FROM 19996 GB:TO 21171 GB:DIRECTION - GB:GENE 43B GB:PRODUCT DNA polymerase, C-terminal fragment GB:NOTE split gene for core DNA polymerase of phage replisome; gp43B GB:PROTEIN_ID AAQ81354.1 GB:DB_XREF GI:34732816 GB:GENE:GENE 43B LENGTH 391 SQ:AASEQ MELELFRDFNEEELTYLNTLSTDELQQMIARCEKEEQKRNTNQLNRKILINSLYGALGNNWFRYFDLRNAEAITTYGQLAIRWIERKLNEYINELVKTTGVDYVCYIDTDSVYLNMEAVVNRVGIDKFRDTNHLIDFLDNLGSKKLEPFIDDSYKELEEYMNHDHHLLLMDREAIFGAPLGSDGIGGFWTGKKRYALNVYDMEGTRYAEPHLKIMGLETQRSSTPLACQKSLKESIRRLLQEGESSLQDYFKEFKDEFKNIPYQDVAAVSSANNIGKNGDALGFPIKGTPYHVKGVLAYNRIAKTDTAIPMISEGEKVMVLPLRDRNPFNEACFAWPSGTPIPPAVEADVLKYLDINKLFDKTFVKPLSSICEATKTDYEFRNNLFDMFDI GT:EXON 1|1-391:0| BL:SWS:NREP 1 BL:SWS:REP 8->390|DPOL_BPR69|e-126|56.3|382/903| PROS 106->114|PS00116|DNA_POLYMERASE_B|PDOC00107| BL:PDB:NREP 1 BL:PDB:REP 8->390|1q9xA|e-127|56.3|382/903| RP:PDB:NREP 1 RP:PDB:REP 27->389|3cfpA|4e-63|59.4|362/901| HM:PFM:NREP 1 HM:PFM:REP 24->374|PF00136|3.3e-28|19.5|298/467|DNA_pol_B| RP:SCP:NREP 1 RP:SCP:REP 6->390|1clqA2|1e-59|58.1|384/528|e.8.1.1| HM:SCP:REP 1->391|1clqA2|3.9e-88|26.2|390/0|e.8.1.1|1/1|DNA/RNA polymerases| OP:NHOMO 13 OP:NHOMOORG 13 OP:PATTERN -----------------------------1-----------------1-------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---1-1-------------1---11----------111-1--------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 390 STR:RPRED 99.7 SQ:SECSTR ccccTTccccHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccEEEEcccEEEEEcHHHHHTTcccccccHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTcccccccEEEEEEEcccTTcccccEEEEETTEEEEEEEEETTEEEEEEEEEEEccGGGcTTccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHGGGccHHHHcEEEEcTTHHHHTHTTTcccTTccHHHHHHHHHHHHTcccTTcccccTTcEEEEEEccTTcTTcccEEEEEccccccHHHHHHHHHcccHHHHHHHHTHHHHHHHHHHHTccccccccccTTcc# DISOP:02AL 23-23,26-28| PSIPRED cccEEEccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccEEEEEEEEEcccccccccEEEEEEEEEEEccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccHHHcccccccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEccccccccccccccccccccHHHHccccccccHHHHHHHcccHHHHHHHHHccccHHHHccHHHcccc //